RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 DPYSQ14117 519 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 CCDC157Q569K6 752 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 ODF2Q5BJF6 829 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 MAP7D3Q8IWC1 876 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 KATNAL2Q8IYT4 538 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 NETO2Q8NC67 525 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TRIM58Q8NG06 486 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TRIM44Q96DX7 344 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 FEM1AQ9BSK4 669 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 PPM1HQ9ULR3 514 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TPX2Q9ULW0 747 aaKnown RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D30Q9Y2I9 924 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 PCDHGA1Q9Y5H4 931 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 A0A0D9SEW6 157 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 TRABD2BA6NFA1 517 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 WASH4PA8MWX3 477 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 TLR4O00206 839 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ENC1O14682 589 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 YKT6O15498 198 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 CTSLP07711 333 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 NNMTP40261 264 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 MAPKAPK2P49137 400 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 PEX5P50542 639 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF135P52742 658 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-206ENST00000544964 OXCT1P55809 520 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 TAS2R38P59533 333 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 CYP4F3Q08477 520 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 POM121L1PQ3SYA9 428 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 MEI1Q5TIA1 1274 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 AADACL2Q6P093 401 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 MFSD7Q6UXD7 560 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SPOCD1Q6ZMY3 1216 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SETD3Q86TU7 594 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-206ENST00000544964 PDZD3Q86UT5 571 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 TRIM69Q86WT6 500 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 CCDC50Q8IVM0 306 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SH2D3CQ8N5H7 860 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 OR7D4Q8NG98 312 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 OR8D1Q8WZ84 308 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ALG3Q92685 438 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SKA1Q96BD8 255 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 CELF6Q96J87 481 aaKnown RBP12.67□□□□□ -0.38
ACTN1-206ENST00000544964 PSMB7Q99436 277 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF670Q9BS34 389 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 MUC3BQ9H195 1237 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 KDM4CQ9H3R0 1056 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 ERVMER34-1Q9H9K5 563 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-206ENST00000544964 SLC25A13Q9UJS0 675 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 VPS28Q9UK41 221 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 HS3ST2Q9Y278 367 aa12.67□□□□□ -0.38
ACTN1-206ENST00000544964 KALRNO60229 2985 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 MIF4GDA9UHW6 222 aaKnown RBP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 RNF103O00237 685 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 MCF2LO15068 1137 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ALOX15BO15296 676 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 KIF5CO60282 957 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 SNAP91O60641 907 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 RFPL3O75679 317 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ZRANB2O95218 330 aaKnown RBP eCLIP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 MT-CO1P00395 513 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ITGAVP06756 1048 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 SRCP12931 536 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 KRT10P13645 584 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 MAT2AP31153 395 aaKnown RBP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ACVRL1P37023 503 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 RXRGP48443 463 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 RWDD2BP57060 319 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 GNA12Q03113 381 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-206ENST00000544964 DLG2Q15700 870 aa12.66□□□□□ -0.38
ACTN1-206ENST00000544964 PIP5KL1Q5T9C9 394 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms