RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ARHGEF2Q92974 986 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ARL8AQ96BM9 186 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 LRRC45Q96CN5 670 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CFAP36Q96G28 342 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RPL10LQ96L21 214 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 NSMCE3Q96MG7 304 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SERPINB12Q96P63 405 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CDK5RAP1Q96SZ6 601 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SH3GL2Q99962 352 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SP110Q9HB58 689 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ZDHHC4Q9NPG8 344 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TDP1Q9NUW8 608 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RBM22Q9NW64 420 aaKnown RBP eCLIP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 NINJ2Q9NZG7 142 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PAK5Q9P286 719 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 BCCIPQ9P287 314 aaKnown RBP eCLIP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SLC17A6Q9P2U8 582 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 STK39Q9UEW8 545 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MTRF1LQ9UGC7 380 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TLDC2A0PJX2 215 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 C5orf60A6NFR6 353 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 OTOL1A6NHN0 477 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RIPK2O43353 540 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 GCATO75600 419 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MT-CO1P00395 513 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 AGTP01019 485 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RHOCP08134 193 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CD70P32970 193 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CSKP41240 450 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ELK3P41970 407 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MAGEA4P43358 317 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 STK19P49842 368 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SLC7A9P82251 487 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 GNA12Q03113 381 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SERINC3Q13530 473 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MORF4L2Q15014 288 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SWI5Q1ZZU3 235 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TEX44Q53QW1 395 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RABGAP1LQ5R372 815 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CEP85LQ5SZL2 805 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CFAP58Q5T655 872 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ALYREFQ86V81 257 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TAX1BP1Q86VP1 789 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 UMODL1-AS1Q8N2C9 162 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ZCCHC9Q8N567 271 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 FBXO36Q8NEA4 188 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 IPMKQ8NFU5 416 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 OR52K1Q8NGK4 314 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MAGEC3Q8TD91 643 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 BCAS4Q8TDM0 211 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SORCS1Q8WY21 1168 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 FGF13Q92913 245 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MRPL38Q96DV4 380 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TMA16Q96EY4 203 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CEP295NLQ96MC4 621 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SAMD11Q96NU1 681 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 FRMD8P1Q9BZ68 369 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ATP13A1Q9HD20 1204 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CLDND1Q9NY35 253 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PPARGC1AQ9UBK2 798 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TBK1Q9UHD2 729 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MCM8Q9UJA3 840 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 MAD1L1Q9Y6D9 718 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 A0A1B0GVM2 712 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CFAP69A5D8W1 941 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 TCAF2A6NFQ2 919 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 HACD1B0YJ81 288 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 H3BQ06 376 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CLUHO75153 1309 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 NEBLO76041 1014 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 PIRTP0C851 137 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ARSAP15289 507 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 MGAT1P26572 445 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 GKP32189 559 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CD86P42081 329 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 PPP3CCP48454 512 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 KPNA1P52294 538 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 EPHA5P54756 1037 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 GPX6P59796 221 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 GNGT1P63211 74 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF844Q08AG5 666 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 NIPAL4Q0D2K0 466 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF177Q13360 481 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CDH18Q13634 790 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 GRM2Q14416 872 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 TTMPQ5BVD1 217 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 FAM78AQ5JUQ0 283 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CERCAMQ5T4B2 595 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ALS2CLQ60I27 953 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 WDFY4Q6ZS81 3184 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 Q7L0L9 218 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 MFN1Q8IWA4 741 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF276Q8N554 614 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 TEKT5Q96M29 485 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 KXD1Q9BQD3 176 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms