RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 POLNQ7Z5Q5 900 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 TFAP2DQ7Z6R9 452 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 BBS7Q8IWZ6 715 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 DSELQ8IZU8 1212 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 OR4M2Q8NGB6 313 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 OR6Q1Q8NGQ2 317 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 RNPEPQ9H4A4 650 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 MAST2Q6P0Q8 1798 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 NFASCO94856 1347 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CYB561D2O14569 222 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 ACOT8O14734 319 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 AIM2O14862 343 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 NDUFS6O75380 124 aaKnown RBP9.55□□□□□ -0.88
CLIP1-214ENST00000540539 PIGNO95427 931 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 MBL2P11226 248 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-214ENST00000540539 MTHFD1P11586 935 aaKnown RBP9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CD1EP15812 388 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 JUNBP17275 347 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CYP2A7P20853 494 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 ZNF76P36508 570 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 PLA2G16P53816 162 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 NME5P56597 212 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CXCL9Q07325 125 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 SLC12A1Q13621 1099 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 ALCAMQ13740 583 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 PDPK2PQ6A1A2 396 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 XAF1Q6GPH4 301 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 CDH24Q86UP0 819 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 OR4M1Q8NGD0 313 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 MARK4Q96L34 752 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 ADI1Q9BV57 179 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 TOR3AQ9H497 397 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 DHX33Q9H6R0 707 aaKnown RBP9.55□□□□□ -0.88
CLIP1-214ENST00000540539 SLC39A1Q9NY26 324 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 GCNT4Q9P109 453 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 PRKAG2Q9UGJ0 569 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 SNX13Q9Y5W8 968 aa9.55□□□□□ -0.88
CLIP1-214ENST00000540539 TIAM2Q8IVF5 1701 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 PRSS44E7EML9 344 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 DCXO43602 365 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 PLA2G6O60733 806 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 UGT2B11O75310 529 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 YES1P07947 543 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 SELLP14151 372 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ZNF250P15622 560 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ATF7P17544 494 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 GLRA2P23416 452 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 MAPKAPK2P49137 400 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 HLCSP50747 726 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ABCE1P61221 599 aaKnown RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 FKBP1AP62942 108 aaKnown RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 CSTF3Q12996 717 aaKnown RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ZNF267Q14586 743 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 HIST2H2ACQ16777 129 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 LETM2Q2VYF4 491 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 C4orf46Q504U0 113 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ALFQ53S48 1182 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 BRDTQ58F21 947 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 WDR44Q5JSH3 913 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 GARNL3Q5VVW2 1013 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ZCCHC23Q6ZST2 131 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 CHSY3Q70JA7 882 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 MAVSQ7Z434 540 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 KRT77Q7Z794 578 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ADGRA1Q86SQ6 560 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 CCDC36Q8IYA8 594 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 OFCC1Q8IZS5 231 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 LRRC47Q8N1G4 583 aaKnown RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 TDRD5Q8NAT2 981 aaKnown RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 FAM149B1Q96BN6 582 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 SGK3Q96BR1 496 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 FBXL20Q96IG2 436 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 DACH2Q96NX9 599 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 FUNDC2Q9BWH2 189 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 TEX13BQ9BXU2 312 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ACSS3Q9H6R3 686 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ITM2CQ9NQX7 267 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ADGRE2Q9UHX3 823 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 STON1Q9Y6Q2 735 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 TBX1O43435 398 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 GRIN3BO60391 1043 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 GREM1O60565 184 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 PRKD3O94806 890 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 POU2F1P14859 743 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 ITGA2P17301 1181 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 NCF2P19878 526 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-214ENST00000540539 TNFAIP3P21580 790 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 MAPK12P53778 367 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 OR2B6P58173 313 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 CCNA1P78396 465 aa9.54□□□□□ -0.88
CLIP1-214ENST00000540539 SCRN3Q0VDG4 424 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms