RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 SEMA6AQ9H2E6 1030 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■■□□ 15.1
NEK6-213ENST00000540326 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 COMMD3-BMI1R4GMX3 469 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 C17orf102A2RUQ5 167 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 TRPC5OSA6NMA1 111 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 PSMD3O43242 534 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 RNASEH2AO75792 299 aaKnown RBP12.55□□□□□ -0.4
NEK6-213ENST00000540326 CLPTM1O96005 669 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
NEK6-213ENST00000540326 MT-CO1P00395 513 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 TFAP2AP05549 437 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 CPB1P15086 417 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 BIRC2Q13490 618 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 HERC3Q15034 1050 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 IL23RQ5VWK5 629 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 PIWIL4Q7Z3Z4 852 aaKnown RBP12.55□□□□□ -0.4
NEK6-213ENST00000540326 ATP6V1E2Q96A05 226 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 MAELQ96JY0 434 aaKnown RBP12.55□□□□□ -0.4
NEK6-213ENST00000540326 OLFM1Q99784 485 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 RTP3Q9BQQ7 232 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 MRPL1Q9BYD6 325 aaKnown RBP12.55□□□□□ -0.4
NEK6-213ENST00000540326 Q9H521 79 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 VCX3AQ9NNX9 186 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 FAM105AQ9NUU6 356 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 TMLHEQ9NVH6 421 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 MPP6Q9NZW5 540 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 CCDC167Q9P0B6 97 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 ZNF236Q9UL36 1845 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 TTC3P53804 2025 aa12.55□□□□□ -0.4
NEK6-213ENST00000540326 PRSS51A0A1B0GVH4 220 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 NPHS1O60500 1241 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 PAGE1O75459 146 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ZNF135P52742 658 aaPredicted RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 RPL26P61254 145 aaKnown RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 MYBPC1Q00872 1141 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 RALGDSQ12967 914 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 NRF1Q16656 503 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 POTEHQ6S545 545 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 TICAM1Q8IUC6 712 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 C2CD4AQ8NCU7 369 aaPredicted RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 HMGCLL1Q8TB92 370 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 SPPL2BQ8TCT7 592 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 MRGPRX2Q96LB1 330 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 TMEM209Q96SK2 561 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 PCDHGA7Q9Y5G6 932 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 E7ENX8 843 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 MATN3O15232 486 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 CSPG5O95196 566 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 CTSHP09668 335 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 TSPAN8P19075 237 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ATP5F1P24539 256 aaPredicted RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 ADRA1AP35348 466 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 PSME3P61289 254 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEK6-213ENST00000540326 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 METTL25Q8N6Q8 603 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ADCY4Q8NFM4 1077 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 PRICKLE1Q96MT3 831 aaPredicted RBP12.54□□□□□ -0.4
NEK6-213ENST00000540326 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 IGSF5Q9NSI5 407 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 TREX1Q9NSU2 369 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 ST3GAL5Q9UNP4 418 aa12.54□□□□□ -0.4
NEK6-213ENST00000540326 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 HAS3O00219 553 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 CCL22O00626 93 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 FAM163BP0C2L3 166 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 CCDC166P0CW27 439 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 PCSK1P29120 753 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 BRCC3P46736 316 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 GEMP55040 296 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 DYNC1I2Q13409 638 aaKnown RBP12.53□□□□□ -0.4
NEK6-213ENST00000540326 LSAMPQ13449 338 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 AGKQ53H12 422 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 LAYNQ6UX15 382 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
NEK6-213ENST00000540326 USP50Q70EL3 339 aaPredicted RBP12.53□□□□□ -0.4
NEK6-213ENST00000540326 LDB1Q86U70 411 aaPredicted RBP12.53□□□□□ -0.4
NEK6-213ENST00000540326 KLHDC8BQ8IXV7 354 aa12.53□□□□□ -0.4
NEK6-213ENST00000540326 TMEM102Q8N9M5 508 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms