RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 PRAM1Q96QH2 718 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 MED15Q96RN5 788 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 FIZ1Q96SL8 496 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 FAM118BQ9BPY3 351 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 LBHD1Q9BQE6 289 aaPredicted RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 MLPHQ9BV36 600 aaPredicted RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 C1orf43Q9BWL3 253 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 INTS2Q9H0H0 1204 aaKnown RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 EPC1Q9H2F5 836 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 NELFAQ9H3P2 528 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 ST6GALNAC4Q9H4F1 302 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 MMRN2Q9H8L6 949 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 ZBTB26Q9HCK0 441 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 SEMA4BQ9NPR2 832 aaPredicted RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 DDX4Q9NQI0 724 aaKnown RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 TMLHEQ9NVH6 421 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 RLIMQ9NVW2 624 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 BEX4Q9NWD9 120 aaPredicted RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 AATFQ9NY61 560 aaKnown RBP eCLIP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 EHD2Q9NZN4 543 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 COX16Q9P0S2 106 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 ZNF70Q9UC06 446 aaPredicted RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 APPL1Q9UKG1 709 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 RALYQ9UKM9 306 aaKnown RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 CNTN6Q9UQ52 1028 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 TRAF3IP3Q9Y228 551 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 RUVBL1Q9Y265 456 aaKnown RBP3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 TBC1D30Q9Y2I9 924 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 VWA7Q9Y334 891 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 PLEKHM1Q9Y4G2 1056 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 SESN1Q9Y6P5 492 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 RELNP78509 3460 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
AC055720.1-201ENST00000539552 TRIOO75962 3097 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 LOC400499M0QZD8 3231 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 MTUS2Q5JR59 1369 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 LOC102723971A0A1B0GUV8 181 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 GAGE10A6NGK3 116 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 TMEM233B4DJY2 109 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 RAB27BO00194 218 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 KIAA0391O15091 583 aaKnown RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 GRM6O15303 877 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CA12O43570 354 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CCNT2O60583 730 aaKnown RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SEC14L2O76054 403 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 RECQL5O94762 991 aaPredicted RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 DDHD2O94830 711 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 HMGCRP04035 888 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 EIF2S1P05198 315 aaKnown RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 GJB1P08034 283 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 C1SP09871 688 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 RARGP13631 454 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 TMEM11P17152 192 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 TPH1P17752 444 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ARF4P18085 180 aaPredicted RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CCNA2P20248 432 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ADRA1BP35368 520 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SREBF1P36956 1147 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 MTIF2P46199 727 aaKnown RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CPA2P48052 419 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 NRIP1P48552 1158 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 LIG4P49917 911 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 NPY4RP50391 375 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 KCNQ1P51787 676 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 WNT3P56703 355 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 PRAMEP78395 509 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 COG7P83436 770 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 GBE1Q04446 702 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 LMAN2Q12907 356 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SP140Q13342 867 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 RCN2Q14257 317 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 PPP1R7Q15435 360 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 STILQ15468 1287 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 INAQ16352 499 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 RABL6Q3YEC7 729 aaPredicted RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CRY2Q49AN0 593 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 BOLA3Q53S33 107 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ZRANB3Q5FWF4 1079 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ATXN7L2Q5T6C5 722 aaPredicted RBP3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 KANK2Q63ZY3 851 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SARM1Q6SZW1 724 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 Q6ZVL8 140 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CHST9Q7L1S5 443 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ADGRG6Q86SQ4 1221 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 LDLRAD3Q86YD5 345 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SYCP3Q8IZU3 236 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SLC15A4Q8N697 577 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 STPG3Q8N7X2 389 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ANKRD44Q8N8A2 993 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 CCDC148Q8NFR7 591 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 HASPINQ8TF76 798 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 WDR60Q8WVS4 1066 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SLC5A11Q8WWX8 675 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 ITFG2Q969R8 447 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 TUBGCP3Q96CW5 907 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 SAAL1Q96ER3 474 aa3.94□□□□□ -1.78
AC055720.1-201ENST00000539552 COG3Q96JB2 828 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms