RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC14A2Q15849 920 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 POM121L1PQ3SYA9 428 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 IZUMO3Q5VZ72 239 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 DUPD1Q68J44 220 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 SYT13Q7L8C5 426 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 KDELC2Q7Z4H8 507 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 MMAAQ8IVH4 418 aaKnown RBP23.73■■□□□ 1.39
TMEM260-202ENST00000538838 PIP4K2CQ8TBX8 421 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 PDCD6IPQ8WUM4 868 aaKnown RBP23.73■■□□□ 1.39
TMEM260-202ENST00000538838 CPT1BQ92523 772 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 MRGPRX2Q96LB1 330 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 PPP1R2P1Q96PQ5 205 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 SLC6A17Q9H1V8 727 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 RSPH9Q9H1X1 276 aaPredicted RBP23.73■■□□□ 1.39
TMEM260-202ENST00000538838 VPS45Q9NRW7 570 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 MYLKQ15746 1914 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 DNALI1O14645 258 aaPredicted RBP23.73■■□□□ 1.39
TMEM260-202ENST00000538838 ATG13O75143 517 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 IL1BP01584 269 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 PRNPP04156 253 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 METAP1P53582 386 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 SPARCL1Q14515 664 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 GRM3Q14832 879 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 ANKRD22Q5VYY1 191 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 KCTD11Q693B1 232 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 GDPD4Q6W3E5 623 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 DSG4Q86SJ6 1040 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 SNF8Q96H20 258 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 KLHL32Q96NJ5 620 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 MKRN2Q9H000 416 aaKnown RBP23.73■■□□□ 1.39
TMEM260-202ENST00000538838 DLGAP2Q9P1A6 1054 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 PPM1HQ9ULR3 514 aa23.73■■□□□ 1.39
TMEM260-202ENST00000538838 TCRBV7S3A2A0A539 114 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 TCRBV21S2A2A0A5A6 115 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 ESYT3A0FGR9 886 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 GOLGA6CA6NDK9 693 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 GOLGA6BA6NDN3 693 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 SOCS5O75159 536 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 AP2A1O95782 977 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 GOLGA6DP0CG33 693 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 AOC1P19801 751 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 LMAN1P49257 510 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 GUCY2DQ02846 1103 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 MTAPQ13126 283 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 KCNJ11Q14654 390 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 CCDC70Q6NSX1 233 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 FICDQ9BVA6 458 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 FSD1LQ9BXM9 530 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 OSBPL1AQ9BXW6 950 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 FBRSQ9HAH7 460 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 GOLGA6AQ9NYA3 693 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 CHKBQ9Y259 395 aa23.72■■□□□ 1.39
TMEM260-202ENST00000538838 KPNA3O00505 521 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 TRAFD1O14545 582 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 HTRA2O43464 458 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 USP12O75317 370 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 TMEM63AO94886 807 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 SEC31AO94979 1220 aaKnown RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 SATB1Q01826 763 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 TRADDQ15628 312 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 RNASEH2BQ5TBB1 312 aaKnown RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 ZNF776Q68DI1 518 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 ZSWIM9Q86XI8 627 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 SPEM1Q8N4L4 309 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 TMIEQ8NEW7 156 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 LRIG1Q96JA1 1093 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 APOL2Q9BQE5 337 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 SUV39H2Q9H5I1 410 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 LRRC40Q9H9A6 602 aa23.71■■□□□ 1.39
TMEM260-202ENST00000538838 EIF2B3Q9NR50 452 aaKnown RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 TPX2Q9ULW0 747 aaKnown RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 V9GYY5 206 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-202ENST00000538838 C1QTNF3-AMACRE9PGA6 284 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 RNASEH1O60930 286 aaKnown RBP23.7■■□□□ 1.39
TMEM260-202ENST00000538838 AGTP01019 485 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 PDHA1P08559 390 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 CA4P22748 312 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 RPS14P62263 151 aaKnown RBP23.7■■□□□ 1.39
TMEM260-202ENST00000538838 CST6Q15828 149 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 PAF1Q8N7H5 531 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 IFT43Q96FT9 208 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 FEM1CQ96JP0 617 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 ZNF641Q96N77 438 aaPredicted RBP23.7■■□□□ 1.39
TMEM260-202ENST00000538838 TRIB3Q96RU7 358 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 TBL1YQ9BQ87 522 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 PCDHB9Q9Y5E1 797 aa23.7■■□□□ 1.39
TMEM260-202ENST00000538838 ERI2A8K979 691 aaKnown RBP23.7■■□□□ 1.38
TMEM260-202ENST00000538838 FZD6O60353 706 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 NDUFV2P19404 249 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 TPSB2P20231 275 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 ADRA1AP35348 466 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 MAGEA6P43360 314 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 DGKEP52429 567 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 CDK18Q07002 472 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 GALNT3Q14435 633 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 TPSAB1Q15661 275 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 TMPRSS6Q8IU80 811 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 PPIL6Q8IXY8 311 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 NAT8LQ8N9F0 302 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms