RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ERCC2P18074 760 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 IL1R2P27930 398 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 PCK1P35558 622 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 PAPOLAP51003 745 aaKnown RBP15.15■□□□□ 0.02
RAB40B-202ENST00000538809 NDST2P52849 883 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 SGCGQ13326 291 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 ACAP1Q15027 740 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 SMTNL2Q2TAL5 461 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 AFMIDQ63HM1 303 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 ARHGAP36Q6ZRI8 547 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 ARHGAP12Q8IWW6 846 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 GALNT15Q8N3T1 639 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 MDM1Q8TC05 714 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 BTBD6Q96KE9 485 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 KLF6Q99612 283 aaPredicted RBP15.15■□□□□ 0.02
RAB40B-202ENST00000538809 DNAJC7Q99615 494 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 C1QTNF2Q9BXJ5 285 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 KLHL11Q9NVR0 708 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 DNAJC28Q9NX36 388 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 MFHAS1Q9Y4C4 1052 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.15■□□□□ 0.02
RAB40B-202ENST00000538809 RP1P56715 2156 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 ASXL3Q9C0F0 2248 aa15.15■□□□□ 0.02
RAB40B-202ENST00000538809 COL27A1Q8IZC6 1860 aaPredicted RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 ARHGAP42A6NI28 874 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 DFFAO00273 331 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TRIM38O00635 465 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 AREL1O15033 823 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 SIGLEC6O43699 453 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 PRAMEF11O60813 436 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 PIAS2O75928 621 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 DGKAP23743 735 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 IGFALSP35858 605 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 RGRP47804 291 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 SMAD1Q15797 465 aaKnown RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 ASTE1Q2TB18 679 aaPredicted RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TPRG1LQ5T0D9 272 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 ALKBH5Q6P6C2 394 aaKnown RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TTC7BQ86TV6 843 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 VPS36Q86VN1 386 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 VSTM4Q8IW00 320 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TP53INP2Q8IXH6 220 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 SLC25A45Q8N413 288 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 NIPA2Q8N8Q9 360 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TSC1Q92574 1164 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 HSPH1Q92598 858 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 ARHGEF26Q96DR7 871 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 WRAP53Q9BUR4 548 aaKnown RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 ZWILCHQ9H900 591 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 SP110Q9HB58 689 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 GPR27Q9NS67 375 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 CWC15Q9P013 229 aaKnown RBP15.14■□□□□ 0.01
RAB40B-202ENST00000538809 HS3ST3A1Q9Y663 406 aa15.14■□□□□ 0.01
RAB40B-202ENST00000538809 TAF4O00268 1085 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 FPGTO14772 594 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 CBFA2T2O43439 604 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 MMP20O60882 483 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 CAPNS1P04632 268 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 TPM3P06753 285 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 TIMP2P16035 220 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 HCAR3P49019 387 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 ZNF135P52742 658 aaPredicted RBP15.13■□□□□ 0.01
RAB40B-202ENST00000538809 DPYSQ14117 519 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 PDE1CQ14123 709 aaPredicted RBP15.13■□□□□ 0.01
RAB40B-202ENST00000538809 TRIM14Q14142 442 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 FZD2Q14332 565 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 DPYSL2Q16555 572 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 ZSCAN30Q86W11 494 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 CXorf40AQ8TE69 158 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 CCDC86Q9H6F5 360 aaKnown RBP15.13■□□□□ 0.01
RAB40B-202ENST00000538809 DONSONQ9NYP3 566 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
RAB40B-202ENST00000538809 COQ6Q9Y2Z9 468 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 PCDHGA1Q9Y5H4 931 aa15.13■□□□□ 0.01
RAB40B-202ENST00000538809 CHD6Q8TD26 2715 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 H3BRJ5 948 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 NEBLO76041 1014 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 PRKCGP05129 697 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 CKMT2P17540 419 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 XPAP23025 273 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 EIF4A3P38919 411 aaKnown RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 RABIFP47224 123 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 SEMG2Q02383 582 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 SLC25A11Q02978 314 aaKnown RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 PIGHQ14442 188 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 CCDC122Q5T0U0 273 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 TXNRD3NBQ6F5E7 133 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 PROSER1Q86XN7 944 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 TSEN2Q8NCE0 465 aaKnown RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 DENND6BQ8NEG7 585 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 OR4C6Q8NH72 309 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 FAM174AQ8TBP5 190 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 NUP85Q9BW27 656 aa15.12■□□□□ 0.01
RAB40B-202ENST00000538809 CINPQ9BW66 212 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 CPEB1Q9BZB8 566 aaKnown RBP15.12■□□□□ 0.01
RAB40B-202ENST00000538809 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms