RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CD248Q9HCU0 757 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 C2orf42Q9NWW7 574 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 A0A1W2PQF6 199 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 BNIP3LO60238 219 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 BANF1O75531 89 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 GJB3O75712 270 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 IGSF6O95976 241 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 CR2P20023 1033 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 FDFT1P37268 417 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 FAM193AP78312 1265 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 SEMA5AQ13591 1074 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 TEX44Q53QW1 395 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 CARD16Q5EG05 197 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 SDE2Q6IQ49 451 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 TMEM92Q6UXU6 159 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 MTERF4Q7Z6M4 381 aaKnown RBP17.43■□□□□ 0.38
CLN6-202ENST00000538696 CHST14Q8NCH0 376 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 OR2AP1Q8NGE2 309 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 OR2A12Q8NGT7 310 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 SAYSD1Q9NPB0 183 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 PRSS16Q9NQE7 514 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 FAM53CQ9NYF3 392 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 NINJ2Q9NZG7 142 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 PLAAQ9Y263 795 aa17.43■□□□□ 0.38
CLN6-202ENST00000538696 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 GOLGA6BA6NDN3 693 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 AGPSO00116 658 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 SMAPO00193 183 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 INSIG1O15503 277 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 ZBTB24O43167 697 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 NEBLO76041 1014 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 TPSB2P20231 275 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 CD68P34810 354 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 MAGEA9P43362 315 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 CCNHP51946 323 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 ARL4CP56559 192 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 SNRPD1P62314 119 aaKnown RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 DSC2Q02487 901 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 CAMK2GQ13555 558 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 TPSAB1Q15661 275 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 SPDYCQ5MJ68 293 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 FNBP1LQ5T0N5 605 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 ALS2CLQ60I27 953 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 ALG1LQ6GMV1 187 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 DPY19L3Q6ZPD9 716 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 SYT13Q7L8C5 426 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 PID1Q7Z2X4 250 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 IQCKQ8N0W5 287 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 STK40Q8N2I9 435 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 OR6K2Q8NGY2 324 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 VOPP1Q96AW1 172 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 TEKT5Q96M29 485 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 AGAP3Q96P47 875 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.382e-7■■■■□ 25.8
CLN6-202ENST00000538696 VAT1Q99536 393 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 GORASP1Q9BQQ3 440 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 GBA3Q9H227 469 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 PABPC3Q9H361 631 aaKnown RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 ACBD3Q9H3P7 528 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 EVLQ9UI08 416 aaPredicted RBP17.42■□□□□ 0.38
CLN6-202ENST00000538696 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
CLN6-202ENST00000538696 ATG13O75143 517 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 NFKB1P19838 968 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 CSNK1DP48730 415 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 CLCN5P51795 746 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 NIPAL4Q0D2K0 466 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 MTAPQ13126 283 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 STARD3Q14849 445 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 FASTKD3Q14CZ7 662 aaKnown RBP17.41■□□□□ 0.38
CLN6-202ENST00000538696 CRY1Q16526 586 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 HIF1AQ16665 826 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 PARP6Q2NL67 630 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 MSS51Q4VC12 460 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 CEP128Q6ZU80 1094 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 TRMT10CQ7L0Y3 403 aaKnown RBP17.41■□□□□ 0.38
CLN6-202ENST00000538696 BMP8AQ7Z5Y6 402 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 SRLQ86TD4 932 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 RYBPQ8N488 228 aaPredicted RBP17.41■□□□□ 0.38
CLN6-202ENST00000538696 SPEM1Q8N4L4 309 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 ARRDC2Q8TBH0 407 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 PBXIP1Q96AQ6 731 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 NUDCD1Q96RS6 583 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 IER2Q9BTL4 223 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 POLR1EQ9GZS1 481 aaKnown RBP17.41■□□□□ 0.38
CLN6-202ENST00000538696 GLOD4Q9HC38 313 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 RSPH14Q9UHP6 348 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 TRHDEQ9UKU6 1024 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
CLN6-202ENST00000538696 E7EVH7 732 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 RIPK2O43353 540 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 SYNCRIPO60506 623 aaKnown RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 CTSLP07711 333 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 APRTP07741 180 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 GKP32189 559 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 MAGEA4P43358 317 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms