RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GLT6D1Q7Z4J2 308 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SLC9A9Q8IVB4 645 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ZNF557Q8N988 423 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 RNASE11Q8TAA1 199 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 TLR8Q9NR97 1041 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 GMIPQ9P107 970 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ZNF879B4DU55 563 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 BCKDKO14874 412 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 GPR182O15218 404 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 NRP2O60462 931 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 KPNA6O60684 536 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TRUB2O95900 331 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 NR4A1P22736 598 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CES1P23141 567 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 IDH2P48735 452 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 RPL19P84098 196 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 MAMLD1Q13495 774 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TMEM44Q2T9K0 475 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SPATS1Q496A3 300 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MIIPQ5JXC2 388 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PPP1R15BQ5SWA1 713 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CYP20A1Q6UW02 462 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TMEM126BQ8IUX1 230 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PRELID2Q8N945 189 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ANKRD52Q8NB46 1076 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 INPP4AQ96PE3 977 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 BBS4Q96RK4 519 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ZNF607Q96SK3 696 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 APOL2Q9BQE5 337 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TMEM165Q9HC07 324 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 PRELID1Q9Y255 219 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SLC9A8Q9Y2E8 581 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SAMHD1Q9Y3Z3 626 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 VIRMAQ69YN4 1812 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 NWD1Q149M9 1564 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CCDC189A1A4V9 331 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 DDX3YO15523 660 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 ZBTB14O43829 449 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 OR6A2O95222 327 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 APOC1P02654 83 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ITGA2BP08514 1039 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ANXA5P08758 320 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 MIPP30301 263 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TCF7P36402 384 aaPredicted RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 CDK18Q07002 472 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ACSM2AQ08AH3 577 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CBWD3Q5JTY5 395 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CBWD5Q5RIA9 395 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ACSM2BQ68CK6 577 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SYCE2Q6PIF2 218 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 KCNT2Q6UVM3 1135 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ARMC8Q8IUR7 673 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 ARL10Q8N8L6 244 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TRPV3Q8NET8 790 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 GPATCH1Q9BRR8 931 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 GSDMCQ9BYG8 508 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
SORT1-209ENST00000538502 TAS2R7Q9NYW3 318 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TAS2R1Q9NYW7 299 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 CRYL1Q9Y2S2 319 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 TLL2Q9Y6L7 1015 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
SORT1-209ENST00000538502 HOXA2O43364 376 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 CSPG5O95196 566 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 IRF1P10914 325 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 TPSB2P20231 275 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 PSMA1P25786 263 aaKnown RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 ZNF143P52747 638 aaPredicted RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 KLF10Q13118 480 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 PLD1Q13393 1074 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 ADGRE1Q14246 886 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 TPSAB1Q15661 275 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 GPRIN3Q6ZVF9 776 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 CDYL2Q8N8U2 506 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 TOP1MTQ969P6 601 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 NXNL1Q96CM4 212 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 IL25Q9H293 177 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 MLXQ9UH92 298 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 A0A1W2PQ72 361 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 PRRG1O14668 218 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 SERPINB7O75635 380 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 SLC22A3O75751 556 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 YES1P07947 543 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 ITIH1P19827 911 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 ERP29P30040 261 aaKnown RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 TTPAP49638 278 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 ACTR3P61158 418 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 SPIBQ01892 262 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 LSM12Q3MHD2 195 aaKnown RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 ZIK1Q3SY52 487 aaPredicted RBP6.96□□□□□ -1.29
SORT1-209ENST00000538502 WDR59Q6PJI9 974 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 BBS12Q6ZW61 710 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 SLC41A1Q8IVJ1 513 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 SLITRK4Q8IW52 837 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 FAM71AQ8IYT1 594 aa6.96□□□□□ -1.29
SORT1-209ENST00000538502 CHPFQ8IZ52 775 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms