RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 RFX8Q6ZV50 586 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 TMPRSS12Q86WS5 348 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 ARHGAP12Q8IWW6 846 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 TP53INP2Q8IXH6 220 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 ZNF548Q8NEK5 533 aaPredicted RBP15.54■□□□□ 0.08
PAAF1-207ENST00000536003 CASKIN2Q8WXE0 1202 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 WRAP53Q9BUR4 548 aaKnown RBP15.54■□□□□ 0.08
PAAF1-207ENST00000536003 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 CBX8Q9HC52 389 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 UBA2Q9UBT2 640 aaPredicted RBP15.54■□□□□ 0.08
PAAF1-207ENST00000536003 MFHAS1Q9Y4C4 1052 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 HS3ST3A1Q9Y663 406 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 U3KQA8 63 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 ASXL3Q9C0F0 2248 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 MMP20O60882 483 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 SERPINC1P01008 464 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 ACP1P24666 158 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 PPP6R3Q5H9R7 873 aaPredicted RBP15.54■□□□□ 0.08
PAAF1-207ENST00000536003 HGSNATQ68CP4 663 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 TTC7BQ86TV6 843 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 VPS36Q86VN1 386 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 PARGQ86W56 976 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 ZSWIM9Q86XI8 627 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 LENG8Q96PV6 779 aaPredicted RBP15.54■□□□□ 0.08
PAAF1-207ENST00000536003 DKK4Q9UBT3 224 aa15.54■□□□□ 0.08
PAAF1-207ENST00000536003 FPGTO14772 594 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 C1SP09871 688 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 GZMAP12544 262 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 NME1P15531 152 aaKnown RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 IL1R2P27930 398 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 HNF1BP35680 557 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PBX1P40424 430 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 RABIFP47224 123 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PAPOLAP51003 745 aaKnown RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PFN3P60673 137 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 INSM1Q01101 510 aaPredicted RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 TARDBPQ13148 414 aaKnown RBP eCLIP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 SGCGQ13326 291 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 ERMARDQ5T6L9 678 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 AFMIDQ63HM1 303 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PPP1R2P3Q6NXS1 205 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 C19orf48Q6RUI8 117 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 RBFAQ8N0V3 343 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 PDCD7Q8N8D1 485 aaKnown RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 DENND6BQ8NEG7 585 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 FNIP1Q8TF40 1166 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 CENPTQ96BT3 561 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 TCEAL2Q9H3H9 227 aaPredicted RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 MBNL1Q9NR56 388 aaKnown RBP15.53■□□□□ 0.08
PAAF1-207ENST00000536003 MYO1AQ9UBC5 1043 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 COQ6Q9Y2Z9 468 aa15.53■□□□□ 0.08
PAAF1-207ENST00000536003 BUB1BO60566 1050 aaPredicted RBP15.52■□□□□ 0.08
PAAF1-207ENST00000536003 CSF2P04141 144 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 PRKCGP05129 697 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 JUPP14923 745 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 TIMP2P16035 220 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 DESP17661 470 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 ERCC2P18074 760 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 HTR7P34969 479 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 NDST2P52849 883 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 SEMG2Q02383 582 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 EIF2B5Q13144 721 aaKnown RBP15.52■□□□□ 0.08
PAAF1-207ENST00000536003 SMTNL2Q2TAL5 461 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 NYAP1Q6ZVC0 841 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 TP53I13Q8NBR0 393 aaPredicted RBP15.52■□□□□ 0.08
PAAF1-207ENST00000536003 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
PAAF1-207ENST00000536003 ARHGEF26Q96DR7 871 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 IFT43Q96FT9 208 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 APOLD1Q96LR9 279 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 NCAPGQ9BPX3 1015 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 NLGN3Q9NZ94 848 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 DKK3Q9UBP4 350 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 LHX6Q9UPM6 363 aa15.52■□□□□ 0.08
PAAF1-207ENST00000536003 RP1P56715 2156 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 TSPAN11A1L157 253 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 K7ESM1 405 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 MUSKO15146 869 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 PRPSAP2O60256 369 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 DAB2P98082 770 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 FANCCQ00597 558 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 RAD51Q06609 339 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 DPYSQ14117 519 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 IRF4Q15306 451 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 KLHL40Q2TBA0 621 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 FIGNQ5HY92 759 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 CAMK1DQ8IU85 385 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 FAM174AQ8TBP5 190 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 ASB12Q8WXK4 309 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 NSMCE3Q96MG7 304 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 CPEB1Q9BZB8 566 aaKnown RBP15.51■□□□□ 0.07
PAAF1-207ENST00000536003 ISCUQ9H1K1 167 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 CWC15Q9P013 229 aaKnown RBP15.51■□□□□ 0.07
PAAF1-207ENST00000536003 SCINQ9Y6U3 715 aa15.51■□□□□ 0.07
PAAF1-207ENST00000536003 DFFAO00273 331 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 SCAMP1O15126 338 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 RNF8O76064 485 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 CKMT1AP12532 417 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 HOXB3P14651 431 aaPredicted RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 MMP12P39900 470 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms