RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 ZNF783Q6ZMS7 281 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 SLC26A9Q7LBE3 791 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 RD3Q7Z3Z2 195 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 TTC7BQ86TV6 843 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 USP7Q93009 1102 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 SMARCE1Q969G3 411 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
CDC27-209ENST00000532893 SCAND2PQ9GZW5 306 aaPredicted RBP14.64□□□□□ -0.07
CDC27-209ENST00000532893 RRN3Q9NYV6 651 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.64□□□□□ -0.07
CDC27-209ENST00000532893 FOXJ2Q9P0K8 574 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 PCDHB11Q9Y5F2 797 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 NOTCH2Q04721 2471 aa14.64□□□□□ -0.07
CDC27-209ENST00000532893 SPTAN1Q13813 2472 aaKnown RBP14.63□□□□□ -0.07
CDC27-209ENST00000532893 BECN2A8MW95 431 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 AREL1O15033 823 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 TM7SF2O76062 418 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 GP1BBP13224 206 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 ITIH2P19823 946 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 SULT1E1P49888 294 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 BLKP51451 505 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 MAPK10P53779 464 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 GNA12Q03113 381 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 DEUP1Q05D60 604 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 ZFP36L1Q07352 338 aaKnown RBP14.63□□□□□ -0.07
CDC27-209ENST00000532893 ARHGAP44Q17R89 818 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 KLHL40Q2TBA0 621 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 KLHL10Q6JEL2 608 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 TRIM59Q8IWR1 403 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 PLPP6Q8IY26 295 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 C1orf131Q8NDD1 294 aaKnown RBP14.63□□□□□ -0.07
CDC27-209ENST00000532893 SPATA20Q8TB22 786 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 ISG20Q96AZ6 181 aaKnown RBP14.63□□□□□ -0.07
CDC27-209ENST00000532893 ARHGEF26Q96DR7 871 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 KLHL32Q96NJ5 620 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 TBCBQ99426 244 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 FUCA2Q9BTY2 467 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 EDEM3Q9BZQ6 932 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 GDPD2Q9HCC8 539 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 ZNF212Q9UDV6 495 aa14.63□□□□□ -0.07
CDC27-209ENST00000532893 TOR1BO14657 336 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 POP4O95707 220 aaKnown RBP14.62□□□□□ -0.07
CDC27-209ENST00000532893 F9P00740 461 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 ACVRL1P37023 503 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 SNX16P57768 344 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 MORC3Q14149 939 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 IGFBP7Q16270 282 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 SKIDA1Q1XH10 827 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 ALG11Q2TAA5 492 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 MYLK3Q32MK0 819 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 PTPN20Q4JDL3 420 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 TTI2Q6NXR4 508 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 NYAP1Q6ZVC0 841 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 ENOSF1Q7L5Y1 443 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 GKN2Q86XP6 184 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 DTX1Q86Y01 620 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 CCNJLQ8IV13 435 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
CDC27-209ENST00000532893 TP53I13Q8NBR0 393 aaPredicted RBP14.62□□□□□ -0.07
CDC27-209ENST00000532893 ZNF397Q8NF99 534 aaPredicted RBP14.62□□□□□ -0.07
CDC27-209ENST00000532893 OR6C4Q8NGE1 309 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 CXorf40AQ8TE69 158 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 JPH3Q8WXH2 748 aaPredicted RBP14.62□□□□□ -0.07
CDC27-209ENST00000532893 NT5C3BQ969T7 300 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 VOPP1Q96AW1 172 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 EPAS1Q99814 870 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 C1QTNF7Q9BXJ2 289 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 STAP1Q9ULZ2 295 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 PAXBP1Q9Y5B6 917 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.62□□□□□ -0.07
CDC27-209ENST00000532893 RELNP78509 3460 aa14.62□□□□□ -0.07
CDC27-209ENST00000532893 A0A1W2PQC6 194 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 C9orf172C9J069 976 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 RASGRP1O95267 797 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 APBA1Q02410 837 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 IRF4Q15306 451 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 ATXN7L2Q5T6C5 722 aaPredicted RBP14.61□□□□□ -0.07
CDC27-209ENST00000532893 ENPP7Q6UWV6 458 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 LEKR1Q6ZMV7 388 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 PGAP3Q96FM1 320 aaPredicted RBP14.61□□□□□ -0.07
CDC27-209ENST00000532893 CMKLR1Q99788 373 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 WRAP53Q9BUR4 548 aaKnown RBP14.61□□□□□ -0.07
CDC27-209ENST00000532893 ZYG11BQ9C0D3 744 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 RNF215Q9Y6U7 377 aa14.61□□□□□ -0.07
CDC27-209ENST00000532893 TMEM110-MUSTN1A8MSY1 372 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 GSRP00390 522 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 KRT9P35527 623 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 PEX5P50542 639 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 SRP54P61011 504 aaKnown RBP14.6□□□□□ -0.07
CDC27-209ENST00000532893 SNRPD1P62314 119 aaKnown RBP14.6□□□□□ -0.07
CDC27-209ENST00000532893 POLD3Q15054 466 aaPredicted RBP14.6□□□□□ -0.07
CDC27-209ENST00000532893 SLC25A52Q3SY17 297 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 PHF19Q5T6S3 580 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 ACBD5Q5T8D3 534 aaPredicted RBP14.6□□□□□ -0.07
CDC27-209ENST00000532893 GDPD4Q6W3E5 623 aa14.6□□□□□ -0.07
CDC27-209ENST00000532893 TMPRSS9Q7Z410 1059 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms