RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 LUC7L3O95232 432 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ADCY5O95622 1261 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CPP00450 1065 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 LMNAP02545 664 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FTLP02792 175 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ATP5BP06576 529 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 GZMAP12544 262 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 HOXB2P14652 356 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 HNRNPLP14866 589 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CD33P20138 364 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 GPD1P21695 349 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 HOXC13P31276 330 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CD70P32970 193 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PTPN9P43378 593 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MRE11P49959 708 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 GUCY1A3Q02108 690 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF177Q13360 481 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MAMLD1Q13495 774 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 AUHQ13825 339 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 UBAP2LQ14157 1087 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ODF1Q14990 250 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 TERF2Q15554 542 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CDO1Q16878 200 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 C15orf59Q2T9L4 293 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PLA2G4EQ3MJ16 856 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ARL13BQ3SXY8 428 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 RNF43Q68DV7 783 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ANO7Q6IWH7 933 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FBXL22Q6P050 247 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 DCUN1D2Q6PH85 259 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 DARS2Q6PI48 645 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 WDR59Q6PJI9 974 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 LRRC31Q6UY01 552 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CHST9Q7L1S5 443 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 STRADAQ7RTN6 431 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MTDHQ86UE4 582 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ADIPOR2Q86V24 386 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ALYREFQ86V81 257 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 WDR5BQ86VZ2 330 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAM131BQ86XD5 332 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 VSTM4Q8IW00 320 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MIER2Q8N344 545 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CLRN3Q8NCR9 226 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 OLIG1Q8TAK6 271 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FIBINQ8TAL6 211 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 SORCS1Q8WY21 1168 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 DIO2Q92813 273 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRIM11Q96F44 468 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ABHD17AQ96GS6 310 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MCEEQ96PE7 176 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 HAPLN3Q96S86 360 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ACOX2Q99424 681 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRMT1Q99873 361 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 GABRG3Q99928 467 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRIM5Q9C035 493 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 SIK2Q9H0K1 926 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 EPC1Q9H2F5 836 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PARVAQ9NVD7 372 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNHIT6Q9NWK9 470 aaKnown RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ARHGEF38Q9NXL2 777 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PDP2Q9P2J9 529 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 THAP10Q9P2Z0 257 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 B4GALT6Q9UBX8 382 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 EBF1Q9UH73 591 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 HCN2Q9UL51 889 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 RAB23Q9ULC3 237 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 VANGL2Q9ULK5 521 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 PLA2G4CQ9UP65 541 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 EMC9Q9Y3B6 208 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 STON1Q9Y6Q2 735 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 A0A1B0GVM2 712 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 A0A1W2PQF6 199 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 TCRBV5S1A1TA0A578 114 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRR23AA6NEV1 266 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 TCAF2A6NFQ2 919 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 WASH3PC4AMC7 463 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 I6L893 689 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 SYNCRIPO60506 623 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 GFRA3O60609 400 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 SRGAP2O75044 1071 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 RTN2O75298 545 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 CLDN11O75508 207 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 RPP40O75818 363 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 ENDOD1O94919 500 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 MOCS3O95396 460 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 CNOT4O95628 575 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 AVPP01185 164 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 PLEKP08567 350 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 DLDP09622 509 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 MYBL1P10243 752 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 POLR2EP19388 210 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 HNRNPH3P31942 346 aaKnown RBP5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 ADRA1BP35368 520 aa5.92□□□□□ -1.46
HMGB1P42-201ENST00000532126 IL12RB1P42701 662 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms