RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 KRT10P13645 584 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 GKP32189 559 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 CSNK1DP48730 415 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 DUSP3P51452 185 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 DAB2P98082 770 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ZNF235Q14590 738 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 DPYSL2Q16555 572 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 CA9Q16790 459 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ODF2Q5BJF6 829 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ABI3BPQ7Z7G0 1075 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 SLCO6A1Q86UG4 719 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 PARGQ86W56 976 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 TMPRSS12Q86WS5 348 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 SPATS2Q86XZ4 545 aaKnown RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 LRRC49Q8IUZ0 686 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ZCCHC14Q8WYQ9 949 aaKnown RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 EXOC2Q96KP1 924 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 C1QTNF2Q9BXJ5 285 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 DNAJC28Q9NX36 388 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 NCKIPSDQ9NZQ3 722 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 CWC15Q9P013 229 aaKnown RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 UVRAGQ9P2Y5 699 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ZFR2Q9UPR6 939 aaKnown RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 CA5BQ9Y2D0 317 aa12.72□□□□□ -0.37
C11orf54-210ENST00000531516 ASCC3Q8N3C0 2202 aaKnown RBP12.72□□□□□ -0.37
C11orf54-210ENST00000531516 A0A087X0T9 212 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 J3KR12 359 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 LZTS3O60299 673 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 CYP1A2P05177 515 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 KRT7P08729 469 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 FAM228BP0C875 321 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 JUPP14923 745 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 CKMT2P17540 419 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 CLDN2P57739 230 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 AP1S1P61966 158 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 BNIP3Q12983 259 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 CYTH1Q15438 398 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 GCNT7Q6ZNI0 430 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 TMPRSS7Q7RTY8 843 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 SRLQ86TD4 932 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 NDUFAF2Q8N183 169 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 OR13H1Q8NG92 308 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 ZNF564Q8TBZ8 553 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 PEBP4Q96S96 227 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 TRIM7Q9C029 511 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 KLC2Q9H0B6 622 aa12.71□□□□□ -0.37
C11orf54-210ENST00000531516 RCOR3Q9P2K3 495 aaPredicted RBP12.71□□□□□ -0.37
C11orf54-210ENST00000531516 ACACBO00763 2458 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 NUMA1Q14980 2115 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 TMEM110-MUSTN1A8MSY1 372 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 AREL1O15033 823 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 MMP20O60882 483 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SDC3O75056 442 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 RARAP10276 462 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 DGKAP23743 735 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 HTR1BP28222 390 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 ABL2P42684 1182 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SCNN1BP51168 640 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 BLKP51451 505 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 CDH6P55285 790 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 YPEL5P62699 121 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 E2F1Q01094 437 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 DPYSQ14117 519 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 PDE1CQ14123 709 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 LBRQ14739 615 aaKnown RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 LRRC14Q15048 493 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SLC18A3Q16572 532 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 UGP2Q16851 508 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 POLNQ7Z5Q5 900 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 CNGA4Q8IV77 575 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 ARFGAP1Q8N6T3 406 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 KCTD6Q8NC69 237 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 GATA6Q92908 595 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 GLMNQ92990 594 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SLC13A1Q9BZW2 595 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 CCDC86Q9H6F5 360 aaKnown RBP12.7□□□□□ -0.38
C11orf54-210ENST00000531516 PDFQ9HBH1 243 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 ADAMTS9Q9P2N4 1935 aa12.7□□□□□ -0.38
C11orf54-210ENST00000531516 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
C11orf54-210ENST00000531516 RNF103O00237 685 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms