RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 AP1G1O43747 822 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 MAN1A2O60476 641 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 IL2RAP01589 272 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 ALPIP09923 528 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 GCLMP48507 274 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 PPARDQ03181 441 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 PPP3CAQ08209 521 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 SEPT6Q14141 434 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 ELOCQ15369 112 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 DEFB109BQ30KR1 87 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 RABGAP1LQ5R372 815 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 ATP1A1-AS1Q5TC04 95 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 FAXCQ5TGI0 409 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 FOXD4L5Q5VV16 416 aaPredicted RBP8.36□□□□□ -1.07
CD44-232ENST00000531118 PARS2Q7L3T8 475 aaKnown RBP8.36□□□□□ -1.07
CD44-232ENST00000531118 FAM114A1Q8IWE2 563 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 CCDC150Q8NCX0 1101 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 CPT1CQ8TCG5 803 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 SCG3Q8WXD2 468 aaKnown RBP8.36□□□□□ -1.07
CD44-232ENST00000531118 MOCOSQ96EN8 888 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 SEMA6CQ9H3T2 930 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 CUEDC2Q9H467 287 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 MMRN2Q9H8L6 949 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 SLC39A2Q9NP94 309 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 PRDM8Q9NQV8 689 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 RAB6BQ9NRW1 208 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 AKAP7Q9P0M2 348 aaPredicted RBP8.36□□□□□ -1.07
CD44-232ENST00000531118 DKK3Q9UBP4 350 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 IL36AQ9UHA7 158 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 VPS28Q9UK41 221 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 APPL1Q9UKG1 709 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 OR51B4Q9Y5P0 310 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 CROCCQ5TZA2 2017 aa8.36□□□□□ -1.07
CD44-232ENST00000531118 IGLON5A6NGN9 336 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 O00370 1275 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 HGSO14964 777 aaPredicted RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 SNAP91O60641 907 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 LEFTY1O75610 366 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 MT-CO1P00395 513 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 NR3C1P04150 777 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 FYNP06241 537 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 CD19P15391 556 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 RRM1P23921 792 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 CASP1P29466 404 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 IRAK1P51617 712 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 VAMP7P51809 220 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 NUCB2P80303 420 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.35□□□□□ -1.07
CD44-232ENST00000531118 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 CEP135Q66GS9 1140 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 TCTN3Q6NUS6 607 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 LVRNQ6Q4G3 990 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 ZC3H18Q86VM9 953 aaKnown RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 VPS36Q86VN1 386 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 GKN2Q86XP6 184 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 RCBTB1Q8NDN9 531 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 GPR156Q8NFN8 814 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 UBA3Q8TBC4 463 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 ASB12Q8WXK4 309 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 STARD8Q92502 1023 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 KIAA1143Q96AT1 154 aaPredicted RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 EEF2KMTQ96G04 330 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 FEM1CQ96JP0 617 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 BTN2A3PQ96KV6 586 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 TAAR9Q96RI9 348 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 PSMB7Q99436 277 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 PRMT1Q99873 361 aaKnown RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 FEM1AQ9BSK4 669 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 GPN2Q9H9Y4 310 aaPredicted RBP8.35□□□□□ -1.07
CD44-232ENST00000531118 CASS4Q9NQ75 786 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 DONSONQ9NYP3 566 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 VPS51Q9UID3 782 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 B3GALT1Q9Y5Z6 326 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 PDZD2O15018 2839 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
CD44-232ENST00000531118 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 MKRN2OSH3BPM6 223 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 K7ERQ8 282 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 LDLRP01130 860 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
CD44-232ENST00000531118 PNLIPP16233 465 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 BLKP51451 505 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 HK3P52790 923 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 YPEL5P62699 121 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 AMPD3Q01432 767 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 SGCGQ13326 291 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 ALG11Q2TAA5 492 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 PMF1Q6P1K2 205 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 DPY19L3Q6ZPD9 716 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 ASB18Q6ZVZ8 466 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 HID1Q8IV36 788 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 CCDC13Q8IYE1 715 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 ATP6V0D2Q8N8Y2 350 aa8.34□□□□□ -1.07
CD44-232ENST00000531118 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms