RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 OLFM2O95897 454 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 F11P03951 625 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 KLKB1P03952 638 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 PRKCGP05129 697 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 ATXN1LP0C7T5 689 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 MYL2P10916 166 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 MBL2P11226 248 aaPredicted RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 ARNTP27540 789 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 HOXD9P28356 352 aaPredicted RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC26A3P40879 764 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 ABCE1P61221 599 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 SIRPB2Q5JXA9 342 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 CCDC149Q6ZUS6 474 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 NECAB2Q7Z6G3 386 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 CIR1Q86X95 450 aaPredicted RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 ARID3BQ8IVW6 561 aaPredicted RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 CFAP52Q8N1V2 620 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 STYXQ8WUJ0 223 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 SKA1Q96BD8 255 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 NSL1Q96IY1 281 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 YME1L1Q96TA2 773 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 RNF38Q9H0F5 515 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 LRMDAQ9H2I8 198 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 ATXN3LQ9H3M9 355 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 APOBEC2Q9Y235 224 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 INSIG1O15503 277 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 MGRN1O60291 552 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 CTSAP10619 480 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 CSF2RAP15509 400 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 GABRB3P28472 473 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 CHRNA4P43681 627 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 PRAMEP78395 509 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 DEFB103AP81534 67 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 INO80DQ53TQ3 878 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 CYB5D1Q6P9G0 228 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 KDELC2Q7Z4H8 507 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 C10orf107Q8IVU9 208 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 HJURPQ8NCD3 748 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 GPR150Q8NGU9 434 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 DIS3LQ8TF46 1054 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 STON2Q8WXE9 905 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 MYEOVQ96EZ4 313 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 SPON2Q9BUD6 331 aa14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 RPL26L1Q9UNX3 145 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-220ENST00000528402 A0A0D9SEW6 157 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 CXorf51AA0A1B0GTR3 108 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 KLHL2O95198 593 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 KCNA4P22459 653 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 CALB2P22676 271 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 PSMA3P25788 255 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 PTPN4P29074 926 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 SERPINB5P36952 375 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC1A2P43004 574 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 RPS24P62847 133 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 IRX4P78413 519 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 ELF3P78545 371 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 CTBP1Q13363 440 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 LRRC26Q2I0M4 334 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 ZNF470Q6ECI4 717 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 MRNIPQ6NTE8 343 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 ZYG11AQ6WRX3 759 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 TBC1D1Q86TI0 1168 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 METTL3Q86U44 580 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 PARP9Q8IXQ6 854 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 FAM217AQ8IXS0 508 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 FIBCD1Q8N539 461 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 OR7D4Q8NG98 312 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 MRPS31Q92665 395 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 USP13Q92995 863 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 CCDC126Q96EE4 140 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 ATXN7L3BQ96GX2 97 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 PAWRQ96IZ0 340 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 PRICKLE1Q96MT3 831 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 NUDCD1Q96RS6 583 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 C1QTNF1Q9BXJ1 281 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 TASP1Q9H6P5 420 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 IL23AQ9NPF7 189 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 OXSMQ9NWU1 459 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.88□□□□□ -0.033e-6■■■■□ 21.3
ECHDC1-220ENST00000528402 SLC2A6Q9UGQ3 507 aa14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 RUVBL2Q9Y230 463 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-220ENST00000528402 CCDC195A0A1B0GUA6 201 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SLCO1B7G3V0H7 640 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 G3V2L1 256 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TEX28O15482 410 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 LDB2O43679 373 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 GLP2RO95838 553 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SERPINA6P08185 405 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 HDCP19113 662 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 CR2P20023 1033 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 OGNP20774 298 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SERPINB3P29508 390 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms