RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 GPR22Q99680 433 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 MLPHQ9BV36 600 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 RHOJQ9H4E5 214 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 NOL11Q9H8H0 719 aaKnown RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 MYRFQ9Y2G1 1151 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 CLDN5O00501 218 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 AHSGP02765 367 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 HDCP19113 662 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 SCNN1AP37088 669 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 IKBKEQ14164 716 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 MAP7D1Q3KQU3 841 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ITPRIPL1Q6GPH6 555 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ZBTB49Q6ZSB9 765 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 SNX31Q8N9S9 440 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ASB9Q96DX5 294 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 RMND5BQ96G75 393 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 OSBPL11Q9BXB4 747 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 CYP4F12Q9HCS2 524 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 MRPL40Q9NQ50 206 aaKnown RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 PIGVQ9NUD9 493 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 NCKIPSDQ9NZQ3 722 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 CIDEBQ9UHD4 219 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN1-208ENST00000527323 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 STMN1P16949 149 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 ADRA1BP35368 520 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 SLC12A2P55011 1212 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 DPYSQ14117 519 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-208ENST00000527323 MTX3Q5HYI7 312 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 FBXO47Q5MNV8 452 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 TMEM151AQ8N4L1 468 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 KDM1BQ8NB78 822 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 SLC29A1Q99808 456 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 MED10Q9BTT4 135 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 EFHD1Q9BUP0 239 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF385DQ9H6B1 395 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 ANK1P16157 1881 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 VCANP13611 3396 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 DCLK1O15075 740 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 MT-CO1P00395 513 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CCDC166P0CW27 439 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CD68P34810 354 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CPT1AP50416 773 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CDH15P55291 814 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 MPP1Q00013 466 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 ZBTB17Q13105 803 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 FASTKQ14296 549 aaKnown RBP12.62□□□□□ -0.39
CAPN1-208ENST00000527323 POU6F1Q14863 301 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CHERPQ8IWX8 916 aaKnown RBP12.62□□□□□ -0.39
CAPN1-208ENST00000527323 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 CRYBG2Q8N1P7 616 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 APPL2Q8NEU8 664 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 ELMO2Q96JJ3 720 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 SLC2A11Q9BYW1 496 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 PADI4Q9UM07 663 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 PCDHGA7Q9Y5G6 932 aa12.62□□□□□ -0.39
CAPN1-208ENST00000527323 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 NEMP2A6NFY4 417 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 ERI2A8K979 691 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 SDHDO14521 159 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 AKAP10O43572 662 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 ARSAP15289 507 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF23P17027 643 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CKMT2P17540 419 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 TKTP29401 623 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CLCN2P51788 898 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 RABGGTBP53611 331 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CDH17Q12864 832 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 LPIN1Q14693 890 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 HFE2Q6ZVN8 426 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CENPLQ8N0S6 344 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 LRRC52Q8N7C0 313 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 GBA3Q9H227 469 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CHST12Q9NRB3 414 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 NSMCE4AQ9NXX6 385 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 CNOT11Q9UKZ1 510 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 C9IYK1 514 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 PSMD12O00232 456 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 UBDO15205 165 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 MAGEB3O15480 346 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 DAB1O75553 588 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 RHDQ02161 417 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 TWF2Q6IBS0 349 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms