RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 SLC7A5P2Q9GIP4 190 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 NSRP1Q9H0G5 558 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 MAGEH1Q9H213 219 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CCDC68Q9H2F9 335 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ZCCHC17Q9NP64 241 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 KCNK9Q9NPC2 374 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ANKEF1Q9NU02 776 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 INTS10Q9NVR2 710 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 NSMCE4AQ9NXX6 385 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GAR1Q9NY12 217 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 RRN3Q9NYV6 651 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CHMP5Q9NZZ3 219 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 KIF17Q9P2E2 1029 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 IGSF9Q9P2J2 1179 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 HDAC6Q9UBN7 1215 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 IPO11Q9UI26 975 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 FZD4Q9ULV1 537 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SLC8A2Q9UPR5 921 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 AKNAQ7Z591 1439 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 FANCAO15360 1455 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ADGRL1O94910 1474 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TEX14Q8IWB6 1497 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SYCP2Q9BX26 1530 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ARHGEF12Q9NZN5 1544 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 PREX2Q70Z35 1606 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 CCDC169A6NNP5 214 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PSMA7O14818 248 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 DSCR3O14972 297 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 NKX2-8O15522 239 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HNRNPRO43390 633 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 CA12O43570 354 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 DNPH1O43598 174 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CCNT1O60563 726 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 NOL3O60936 208 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 CBFA2T3O75081 653 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PALMO75781 387 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 RPP40O75818 363 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 TNFRSF6BO95407 300 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CAPN3P20807 821 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ATP5F1P24539 256 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 S100A5P33763 92 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 GALNSP34059 522 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 MAP2K2P36507 400 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HNF4AP41235 474 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 AARSP49588 968 aaKnown RBP eCLIP3.32□□□□□ -1.88
COPB1-205ENST00000526527 SULT1E1P49888 294 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 MNAT1P51948 309 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HAND2P61296 217 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 GPC5P78333 572 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 RAE1P78406 368 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 PSG6Q00889 435 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 TLE3Q04726 772 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 GOLGA8FQ08AF8 430 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HYAL1Q12794 435 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CUL4BQ13620 913 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ZNF268Q14587 947 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 ASIC2Q16515 512 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 KBTBD12Q3ZCT8 623 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ANKDD1AQ495B1 522 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 TRIM60Q495X7 471 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 C5orf22Q49AR2 442 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CCDC40Q4G0X9 1142 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 SETMARQ53H47 684 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 NUGGCQ68CJ6 796 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 DGAT2L7PQ6IED9 249 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 SULT6B1Q6IMI4 303 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 RETSATQ6NUM9 610 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ACSM6Q6P461 480 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 SHC4Q6S5L8 630 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PIK3AP1Q6ZUJ8 805 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 B4GALNT4Q76KP1 1039 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CEP57Q86XR8 500 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ITPRIPQ8IWB1 547 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CCDC170Q8IYT3 715 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D21Q8IYX1 336 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CARNMT1Q8N4J0 409 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 NKAPQ8N5F7 415 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 TMCO5AQ8N6Q1 288 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 IL17REQ8NFR9 667 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 TRIM58Q8NG06 486 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 OR6Y1Q8NGX8 325 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CTCFLQ8NI51 663 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 UTP15Q8TED0 518 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 SLC22A17Q8WUG5 538 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 KAT2BQ92831 832 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 EDC3Q96F86 508 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 RADILQ96JH8 1075 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 C16orf45Q96MC5 204 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 RUFY1Q96T51 708 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 BARD1Q99728 777 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 TUBA1CQ9BQE3 449 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HERC2P3Q9BVR0 1158 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 NUAK2Q9H093 628 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CDCP1Q9H5V8 836 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PRDM8Q9NQV8 689 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ABHD10Q9NUJ1 306 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PDP2Q9P2J9 529 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms