RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ENC1O14682 589 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 WNT9AO14904 365 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 RFPL3O75679 317 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 TBC1D3HP0C7X1 549 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 AMPD1P23109 780 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 KDELR1P24390 212 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 DRD3P35462 400 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 HNF1BP35680 557 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 ACVRL1P37023 503 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 SERPINH1P50454 418 aaKnown RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 ARSEP51690 589 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 METAP1P53582 386 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 NXPH1P58417 271 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 SLC20A2Q08357 652 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 CYP4F3Q08477 520 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 ATP13A4Q4VNC1 1196 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 TBC1D3GQ6DHY5 549 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 TBC1D3CQ6IPX1 549 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 NAPEPLDQ6IQ20 393 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 TBC1D3Q8IZP1 549 aaPredicted RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 OXR1Q8N573 874 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 SH2D3CQ8N5H7 860 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 RNF10Q8N5U6 811 aaKnown RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 SAP25Q8TEE9 199 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
VPS28-204ENST00000526054 OR8D1Q8WZ84 308 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 NXPE2Q96DL1 559 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 HMCESQ96FZ2 354 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 CCDC114Q96M63 670 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 TRIM10Q9UDY6 481 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 DUSP10Q9Y6W6 482 aa10.3□□□□□ -0.76
VPS28-204ENST00000526054 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 GRID2IPA4D2P6 1211 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 C10orf142B7Z368 130 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 C1QTNF3-AMACRE9PGA6 284 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 TLR4O00206 839 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 DFFAO00273 331 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 PLK4O00444 970 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 SLC7A4O43246 635 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 LATO43561 262 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 PLRG1O43660 514 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 KDELR3O43731 214 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 ATP9BO43861 1147 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 ZMPSTE24O75844 475 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 LDOC1O95751 146 aaPredicted RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 CD48P09326 243 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 SRCP12931 536 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 GLDCP23378 1020 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 MAT2AP31153 395 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 RECQLP46063 649 aaPredicted RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 ARF5P84085 180 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 SERINC3Q13530 473 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 SHBQ15464 509 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 DLG2Q15700 870 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 POM121L1PQ3SYA9 428 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 ACCSLQ4AC99 568 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 HS1BP3Q53T59 392 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 FAM46CQ5VWP2 391 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 C22orf39Q6P5X5 142 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 LINGO4Q6UY18 593 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 ZNF662Q6ZS27 426 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 Q6ZVU0 165 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 PEX26Q7Z412 305 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 TMPRSS12Q86WS5 348 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 KATNAL2Q8IYT4 538 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 EID2Q8N6I1 236 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 NPWQ8N729 165 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 CASKIN2Q8WXE0 1202 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 FAM131CQ96AQ9 280 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 RBM41Q96IZ5 413 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 CELF6Q96J87 481 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 MAK16Q9BXY0 300 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 CEP44Q9C0F1 390 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 NOL6Q9H6R4 1146 aaKnown RBP10.29□□□□□ -0.76
VPS28-204ENST00000526054 LRRC19Q9H756 370 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 SP110Q9HB58 689 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 AMFRQ9UKV5 643 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 GUCA1BQ9UMX6 200 aa10.29□□□□□ -0.76
VPS28-204ENST00000526054 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 CCDC66A2RUB6 948 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 ALOX15BO15296 676 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 BNIP3LO60238 219 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 MAGEC1O60732 1142 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 PALMO75781 387 aa10.28□□□□□ -0.76
VPS28-204ENST00000526054 CDK4P11802 303 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms