RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CSTF3Q12996 717 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 CNGA3Q16281 694 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ERCC6LQ2NKX8 1250 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DPCR1Q3MIW9 517 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PABPC1LQ4VXU2 614 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 ZNF569Q5MCW4 686 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SFMBT2Q5VUG0 894 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KRT79Q5XKE5 535 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DBX2Q6ZNG2 339 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 TRAPPC11Q7Z392 1133 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KCTD20Q7Z5Y7 419 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SYVN1Q86TM6 617 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 IQCHQ86VS3 1027 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 AMZ2Q86W34 360 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 WFDC3Q8IUB2 231 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CARFQ8N187 725 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 EIF1ADQ8N9N8 165 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 AGBL3Q8NEM8 1001 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DBF4BQ8NFT6 615 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 OR52E1Q8NGJ3 308 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 OR2T34Q8NGX1 318 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 LILRB4Q8NHJ6 448 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PIWIL2Q8TC59 973 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 LRRC8CQ8TDW0 803 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 WFDC12Q8WWY7 111 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CASKIN2Q8WXE0 1202 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ARHGAP45Q92619 1136 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 RNFT2Q96EX2 444 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 MCRS1Q96EZ8 462 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KLHL15Q96M94 604 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 HS6ST2Q96MM7 605 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 NUDCD1Q96RS6 583 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CLSTN3Q9BQT9 956 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 RIOK1Q9BRS2 568 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 SSBP4Q9BWG4 385 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 AMNQ9BXJ7 453 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 TLR10Q9BXR5 811 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 FOXP3Q9BZS1 431 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 THAP2Q9H0W7 228 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 GLT8D2Q9H1C3 349 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CCDC134Q9H6E4 229 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 TUFT1Q9NNX1 390 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PALMDQ9NP74 551 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 RRP7BPQ9NSQ0 103 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 FAM212BQ9NTI7 297 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 TMEM140Q9NV12 185 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DNAJC17Q9NVM6 304 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 FBXO34Q9NWN3 711 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KLHL14Q9P2G3 628 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DNMT3BQ9UBC3 853 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 TRPS1Q9UHF7 1281 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 BAIAP2L1Q9UHR4 511 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CNOT11Q9UKZ1 510 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 MKLN1Q9UL63 735 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SSX2IPQ9Y2D8 614 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ZBTB1Q9Y2K1 713 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 U3KQV3 271 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 WRNQ14191 1432 aaPredicted RBP eCLIP4.56□□□□□ -1.68
CD44-213ENST00000525209 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.56□□□□□ -1.68
CD44-213ENST00000525209 SSU72P8A0A1W2PR75 194 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PMS2P1A4D2B8 440 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 ACOD1A6NK06 481 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 QSOX1O00391 747 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 NRP1O14786 923 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 LIASO43766 372 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PRAMEF4O60810 478 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 AVILO75366 819 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 MTX2O75431 263 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 NTRK1P04629 796 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FAM58BPP0C7Q3 252 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 THRBP10828 461 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PCNAP12004 261 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 CD19P15391 556 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FPR1P21462 350 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FUT4P22083 530 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 NR2F2P24468 414 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 CD27P26842 260 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PSMA5P28066 241 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 RFC2P35250 354 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 CCT6AP40227 531 aaKnown RBP4.56□□□□□ -1.68
CD44-213ENST00000525209 NR2C2P49116 596 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PEX5P50542 639 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PTH1RQ03431 593 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 CD69Q07108 199 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 RAB3GAP1Q15042 981 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 KARSQ15046 597 aaKnown RBP4.56□□□□□ -1.68
CD44-213ENST00000525209 TAZQ16635 292 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 PLA1AQ53H76 456 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FASTKD1Q53R41 847 aaKnown RBP4.56□□□□□ -1.68
CD44-213ENST00000525209 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 MDH1BQ5I0G3 518 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 FAM171A1Q5VUB5 890 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 DAB2IPQ5VWQ8 1189 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 HLA-DQA1Q5Y7H0 255 aa4.56□□□□□ -1.68
CD44-213ENST00000525209 MSANTD2Q6P1R3 559 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms