RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RAB7BQ96AH8 199 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 BMFQ96LC9 184 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 CINPQ9BW66 212 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-205ENST00000525079 CALN1Q9BXU9 219 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
TRAPPC4-205ENST00000525079 UVRAGQ9P2Y5 699 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 PCNX2A6NKB5 2137 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 MUSKO15146 869 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 TSPAN6O43657 245 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 PCDHGA12O60330 932 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 MMP20O60882 483 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 PRKCGP05129 697 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 ITGAVP06756 1048 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 ATXN1LP0C7T5 689 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 FTH1P19P0C7X4 201 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 XPAP23025 273 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 ARSEP51690 589 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SEMG2Q02383 582 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 LBRQ14739 615 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 CCDC157Q569K6 752 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 Q6ZSR6 202 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SLCO6A1Q86UG4 719 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 IQCHQ86VS3 1027 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 CNGA4Q8IV77 575 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 BAHD1Q8TBE0 780 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SLC35G2Q8TBE7 412 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SAP25Q8TEE9 199 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 WRAP53Q9BUR4 548 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SCNM1Q9BWG6 230 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 C1QTNF2Q9BXJ5 285 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 SUV39H2Q9H5I1 410 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 WASF3Q9UPY6 502 aa12.99□□□□□ -0.33
TRAPPC4-205ENST00000525079 KNL1Q8NG31 2342 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 POM121BA6NF01 834 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 AREL1O15033 823 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 SDC3O75056 442 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 EPHA8P29322 1005 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 GRK6P43250 576 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 SCNN1BP51168 640 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 SHC2P98077 582 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 OVGP1Q12889 678 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZFYVE27Q5T4F4 411 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 CFAP58Q5T655 872 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 PTAR1Q7Z6K3 402 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZSWIM9Q86XI8 627 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 EID2Q8N6I1 236 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 TC2NQ8N9U0 490 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 CDC6Q99741 560 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 DKK3Q9UBP4 350 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 TRPM6Q9BX84 2022 aa12.98□□□□□ -0.33
TRAPPC4-205ENST00000525079 A6NNZ2 444 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 MAFKO60675 156 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 PEX11BO96011 259 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 RXRGP48443 463 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 CSNK1DP48730 415 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF75DP51815 510 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF235Q14590 738 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 GRM3Q14832 879 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ANKRD20A8PQ5CZ79 823 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF542PQ5EBM4 170 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ABI3BPQ7Z7G0 1075 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 GLRX5Q86SX6 157 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 GAS2L3Q86XJ1 694 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 SLC22A18ASQ8N1D0 253 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ATPAF2Q8N5M1 289 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 FAM71BQ8TC56 605 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF599Q96NL3 588 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 KLF6Q99612 283 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 ATP13A3Q9H7F0 1226 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 PCDH12Q9NPG4 1184 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 KLK13Q9UKR3 277 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 APOBEC2Q9Y235 224 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 COQ6Q9Y2Z9 468 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 HYOU1Q9Y4L1 999 aa12.97□□□□□ -0.33
TRAPPC4-205ENST00000525079 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TSPAN11A1L157 253 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 A8MX80 341 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 FPGTO14772 594 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TNFSF14O43557 240 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 MFSD11O43934 449 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TM7SF2O76062 418 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 KRT7P08729 469 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms