RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SYNCRIPO60506 623 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 SOCS5O75159 536 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 USP12O75317 370 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 SUN1O94901 812 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 PIGNO95427 931 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 TUBBP07437 444 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 GKP32189 559 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 VSNL1P62760 191 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 CDK18Q07002 472 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 TRAF2Q12933 501 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 IHHQ14623 411 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 STARD3Q14849 445 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 CFAP58Q5T655 872 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 WDR93Q6P2C0 686 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 KDELC2Q7Z4H8 507 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 STK40Q8N2I9 435 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 IL17RCQ8NAC3 791 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 TXNDC5Q8NBS9 432 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 MCUQ8NE86 351 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 RPLP0P6Q8NHW5 317 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 PDCD6IPQ8WUM4 868 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 FEM1CQ96JP0 617 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 APOL2Q9BQE5 337 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 PARD6BQ9BYG5 372 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 FRMD8Q9BZ67 464 aaPredicted RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 CPEB1Q9BZB8 566 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 LTB4R2Q9NPC1 389 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 ZDHHC18Q9NUE0 388 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 MTRF1LQ9UGC7 380 aaKnown RBP16■□□□□ 0.15
TSPAN4-213ENST00000524895 NFU1Q9UMS0 254 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 PCDHGC4Q9Y5F7 938 aa16■□□□□ 0.15
TSPAN4-213ENST00000524895 ALOX15BO15296 676 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 TP73O15350 636 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 AGTP01019 485 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 PRNPP04156 253 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 UGT2B4P06133 528 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 HOXB2P14652 356 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 ZXDAP98168 799 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 OLIG2Q13516 323 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 HSF5Q4G112 596 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 GDPD4Q6W3E5 623 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 DSG4Q86SJ6 1040 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 CAMK1DQ8IU85 385 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 GSPT2Q8IYD1 628 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 SYNPOQ8N3V7 929 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 ZCCHC9Q8N567 271 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 EIF1ADQ8N9N8 165 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 DNAAF3Q8N9W5 541 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 LRIG1Q96JA1 1093 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 NSMCE3Q96MG7 304 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 NELL2Q99435 816 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 FMO2Q99518 471 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 GABRG3Q99928 467 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 OSBPL1AQ9BXW6 950 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 FOXQ1Q9C009 403 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 NEUROG2Q9H2A3 272 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 TBC1D17Q9HA65 648 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 PRSS16Q9NQE7 514 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 CHKBQ9Y259 395 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 ARIH1Q9Y4X5 557 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 WASF2Q9Y6W5 498 aa15.99■□□□□ 0.15
TSPAN4-213ENST00000524895 MYO18AQ92614 2054 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 AP3B1O00203 1094 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 STK25O00506 426 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 LEFTY1O75610 366 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 CHRNB1P11230 501 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 HLA-DPA1P20036 260 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ECHS1P30084 290 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ADRA1AP35348 466 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ARL4CP56559 192 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 CDH17Q12864 832 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 CAMK2GQ13555 558 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 GALNT3Q14435 633 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 HIF1AQ16665 826 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ARSIQ5FYB1 569 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ARMC12Q5T9G4 340 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 PDIK1LQ8N165 341 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 SLC25A41Q8N5S1 370 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 LPCAT1Q8NF37 534 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 OR52K1Q8NGK4 314 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ERLEC1Q96DZ1 483 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ZNF641Q96N77 438 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 SERPINB12Q96P63 405 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 UHRF1Q96T88 793 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 ADGRE3Q9BY15 652 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 FOXP3Q9BZS1 431 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 LMAN1LQ9HAT1 526 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 PCDHB9Q9Y5E1 797 aa15.98■□□□□ 0.15
TSPAN4-213ENST00000524895 UQCRHLA0A096LP55 91 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 LOC285095A0A1B0GVY8 99 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 FAM170BA6NMN3 283 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 C1QTNF3-AMACRE9PGA6 284 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 TRAFD1O14545 582 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms