RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TGFB1I1O43294 461 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PRNPP04156 253 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 SMPD1P17405 629 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PTPN2P17706 415 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 YBEYP58557 167 aaPredicted RBP16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 MAXP61244 160 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 SAMD4BQ5PRF9 694 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PSRC1Q6PGN9 363 aaPredicted RBP16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PHYKPLQ8IUZ5 450 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 ALLCQ8N6M5 410 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 TPD52L3Q96J77 140 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PPP3R2Q96LZ3 170 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PALMDQ9NP74 551 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 TPP1O14773 563 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 C1RP00736 705 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 ZSCAN5DPP0CG00 497 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 ZNF24P17028 368 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 CTPS1P17812 591 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 CORO1AP31146 461 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 HTR7P34969 479 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 AP5B1Q2VPB7 878 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 GOLGA2P5Q9HBQ8 144 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 INTS7Q9NVH2 962 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 TBC1D30Q9Y2I9 924 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 CCNDBP1O95273 360 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 ATG7O95352 703 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 LDLRP01130 860 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 ADRA1BP35368 520 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 WNT3AP56704 352 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 FEM1CQ96JP0 617 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 PRDM4Q9UKN5 801 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
PCDHA3-201ENST00000522353 H3BN98 237 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 CALCAP01258 141 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 TFEBP19484 476 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 TXNDC11Q6PKC3 985 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 GATAD2AQ86YP4 633 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 FERD3LQ96RJ6 166 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 SMAD5Q99717 465 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 ACBD6Q9BR61 282 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 CCDC167Q9P0B6 97 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 GMIPQ9P107 970 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 RCOR3Q9P2K3 495 aaPredicted RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 SNUPNO95149 360 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 TYW3Q6IPR3 259 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 LNX1Q8TBB1 728 aaPredicted RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 ZBTB10Q96DT7 871 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 CLIC5Q9NZA1 410 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 hCG_1818297A0A087WSY0 165 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 ENO4A6NNW6 628 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 BTNL10A8MVZ5 291 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 CD3EAPO15446 510 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 TSPAN1O60635 241 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 PRKAG1P54619 331 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 KLHL23Q8NBE8 558 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 DDHD1Q8NEL9 900 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 OR4L1Q8NH43 312 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 ANKRD27Q96NW4 1050 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 RERGLQ9H628 205 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 DHX33Q9H6R0 707 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 FBXO5Q9UKT4 447 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 HIST1H2ABP04908 130 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 OLFML2BQ68BL8 750 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 HIST3H2AQ7L7L0 130 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 HIST1H2ACQ93077 130 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 LGMNQ99538 433 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 RABGEF1Q9UJ41 708 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 PCDHGA4Q9Y5G9 962 aa16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
PCDHA3-201ENST00000522353 UNCXA6NJT0 531 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 OTCP00480 354 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 TALDO1P37837 337 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 RPL7AP62424 266 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 COMMD2Q86X83 199 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 FAM20CQ8IXL6 584 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ACMSDQ8TDX5 336 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 AENQ8WTP8 325 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 MTERF3Q96E29 417 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 BTBD10Q9BSF8 475 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ROGDIQ9GZN7 287 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 EPB41L4BQ9H329 900 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 MMADHCQ9H3L0 296 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ADAM30Q9UKF2 790 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 AVILO75366 819 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 RECQL5O94762 991 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 NAGLUP54802 743 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 IL5RAQ01344 420 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ABRQ12979 859 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 OASLQ15646 514 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 MIIPQ5JXC2 388 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ZFP1Q6P2D0 407 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 CREG2Q8IUH2 290 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 OR10G6Q8NH81 332 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PAPOLBQ9NRJ5 636 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms