RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 HECAQ9UBI9 543 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 NEU3Q9UQ49 428 aa12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 CA5BQ9Y2D0 317 aa12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 HS3ST3A1Q9Y663 406 aa12.66□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM149AA5PLN7 773 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM72CH0Y354 149 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 RAMP2O60895 175 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 GJB6O95452 261 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 GSRP00390 522 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 JUPP14923 745 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 ACVRL1P37023 503 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM72AQ5TYM5 149 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 SEL1L3Q68CR1 1132 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM72DQ6L9T8 149 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 GCNT7Q6ZNI0 430 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM72BQ86X60 149 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 CACTIN-AS1Q8N1I8 211 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 CCDC185Q8N715 623 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 OR2AP1Q8NGE2 309 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 MYOCQ99972 504 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 SLC17A9Q9BYT1 436 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 RNF14Q9UBS8 474 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
TRAPPC9-206ENST00000519482 URB1O60287 2271 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 C16orf96A6NNT2 1141 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 A6NNZ2 444 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 FANCGO15287 622 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 TSPAN6O43657 245 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 KDELR3O43731 214 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 POP4O95707 220 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 DGKAP23743 735 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ACP1P24666 158 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 AIF1P55008 147 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CYP4F3Q08477 520 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ZNF211Q13398 564 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 EFHC2Q5JST6 749 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 PPP1R2P3Q6NXS1 205 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 SLC25A45Q8N413 288 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ASB12Q8WXK4 309 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 LENG8Q96PV6 779 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 OSBPL1AQ9BXW6 950 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 MAGEB5Q9BZ81 275 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 TM6SF2Q9BZW4 377 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 FZD3Q9NPG1 666 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 GPR27Q9NS67 375 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CACNA1GO43497 2377 aa12.64□□□□□ -0.39
TRAPPC9-206ENST00000519482 CTAGE15A4D2H0 777 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 RCCD1A6NED2 376 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 SDC3O75056 442 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 PIAS2O75928 621 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 PAK4O96013 591 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 CTAGE8P0CG41 777 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 DESP17661 470 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 CLDN2P57739 230 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 YBEYP58557 167 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 MYLK3Q32MK0 819 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 INO80DQ53TQ3 878 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 ZNF805Q5CZA5 627 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 PPP1R15BQ5SWA1 713 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 HES3Q5TGS1 186 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 Q6ZSR6 202 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 CTAGE6Q86UF2 777 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 CTAGE4Q8IX94 777 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
TRAPPC9-206ENST00000519482 RTL3Q8N8U3 475 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms