RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 MT-CO1P00395 513 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 MT-CO3P00414 261 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 PRB1P04280 392 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ERBB2P04626 1255 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 RRM1P23921 792 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 SULT1E1P49888 294 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 TAS2R38P59533 333 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 RNASE9P60153 205 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 TBC1D25Q3MII6 688 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 C5orf22Q49AR2 442 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 PTPN20Q4JDL3 420 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ALFQ53S48 1182 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ACBD5Q5T8D3 534 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 C22orf39Q6P5X5 142 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ERN2Q76MJ5 926 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 TMC6Q7Z403 805 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 PTAR1Q7Z6K3 402 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 C14orf80Q86SX3 495 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 SETD3Q86TU7 594 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 SLC25A45Q8N413 288 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 DCAF4L2Q8NA75 395 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 LSM14AQ8ND56 463 aaKnown RBP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ZNF248Q8NDW4 579 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 TMIEQ8NEW7 156 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 OR13H1Q8NG92 308 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 OR2A12Q8NGT7 310 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 DEPDC7Q96QD5 511 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 ABCG4Q9H172 646 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 PIGVQ9NUD9 493 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 UCKL1Q9NWZ5 548 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 DNAJC28Q9NX36 388 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 NLGN3Q9NZ94 848 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 IL36AQ9UHA7 158 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 PIEZO2Q9H5I5 2752 aa9.08□□□□□ -0.96
CDC42SE2-212ENST00000515533 AHCTF1Q8WYP5 2266 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 SCN8AQ9UQD0 1980 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 A0A0D9SEW6 157 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 K7ERQ8 282 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 SMAD6O43541 496 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 F9P00740 461 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 CKMT1AP12532 417 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 OR1E1P30953 314 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 CXCR3P49682 368 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 DUSP3P51452 185 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 NEK3P51956 506 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 CLDN2P57739 230 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 HNRNPKP61978 463 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 RPS21P63220 83 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 CXADRP78310 365 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 NRG1Q02297 640 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 APBA1Q02410 837 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TLE3Q04726 772 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 DEUP1Q05D60 604 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TPD52L1Q16890 204 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ZNF284Q2VY69 593 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 BROXQ5VW32 411 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 KIAA1161Q6NSJ0 714 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 RETSATQ6NUM9 610 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 LINGO4Q6UY18 593 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 GCNT7Q6ZNI0 430 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TFAP2DQ7Z6R9 452 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 SLC47A2Q86VL8 602 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ERICH1Q86X53 443 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 DCP2Q8IU60 420 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 SPACA3Q8IXA5 215 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 LSMEM2Q8N112 164 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TMEM35BQ8NCS4 154 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ZNF397Q8NF99 534 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ARRDC3Q96B67 414 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 APOLD1Q96LR9 279 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ZNF578Q96N58 590 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 PSMB7Q99436 277 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 NPY6RQ99463 290 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 DUSP23Q9BVJ7 150 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TNKS2Q9H2K2 1166 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 TMEM51Q9NW97 253 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 ARHGEF38Q9NXL2 777 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 RWDD2AQ9UIY3 292 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 RAI2Q9Y5P3 530 aa9.07□□□□□ -0.96
CDC42SE2-212ENST00000515533 SCAMP1O15126 338 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 OPA1O60313 960 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 USP12O75317 370 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 LEFTY1O75610 366 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 NEBLO76041 1014 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 ENDOD1O94919 500 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 MPOP05164 745 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 GP1BAP07359 652 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 ADRB3P13945 408 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 PON1P27169 355 aa9.06□□□□□ -0.96
CDC42SE2-212ENST00000515533 DNA2P51530 1060 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms