RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-211ENST00000514893 ASPDHA6ND91 283 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 OR6C68A6NDL8 312 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 ZNF587BE7ETH6 402 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 CAPN9O14815 690 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 FMO5P49326 533 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 SLC20A2Q08357 652 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 COBLL1Q53SF7 1204 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 ZC2HC1BQ5TFG8 222 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 NFRKBQ6P4R8 1299 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 ZC3HC1Q86WB0 502 aaKnown RBP3.74□□□□□ -1.81
NEDD4-211ENST00000514893 RNF183Q96D59 192 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 CSF3RQ99062 836 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 TMLHEQ9NVH6 421 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 TAAR2Q9P1P5 351 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 FAM50BQ9Y247 325 aa3.74□□□□□ -1.81
NEDD4-211ENST00000514893 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 HSPA12AO43301 675 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 ASNA1O43681 348 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 TUBBP07437 444 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 LYL1P12980 280 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 CD53P19397 219 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 TUBB4BP68371 445 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 DCTN1Q14203 1278 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 RPS6KA2Q15349 733 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 AMZ1Q400G9 498 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 STXBP4Q6ZWJ1 553 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 SHFQ7M4L6 423 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 DSG4Q86SJ6 1040 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 SLC9B2Q86UD5 537 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 PTGR2Q8N8N7 351 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-211ENST00000514893 CPT1BQ92523 772 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 RIPOR3Q96MK2 946 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 ANKRD10Q9NXR5 420 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 SLC9A2Q9UBY0 812 aa3.73□□□□□ -1.81
NEDD4-211ENST00000514893 PMS2P5A8MQ11 134 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 WNT9BO14905 357 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 CHN1P15882 459 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 AVPR2P30518 371 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 SAFBQ15424 915 aaKnown RBP eCLIP3.72□□□□□ -1.81
NEDD4-211ENST00000514893 BSPRYQ5W0U4 402 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 RAB11FIP2Q7L804 512 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 C11orf96Q7Z7L8 435 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 ADAD2Q8NCV1 583 aaKnown RBP3.72□□□□□ -1.81
NEDD4-211ENST00000514893 TSR2Q969E8 191 aaKnown RBP3.72□□□□□ -1.81
NEDD4-211ENST00000514893 ZNF599Q96NL3 588 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 NAA15Q9BXJ9 866 aaKnown RBP3.72□□□□□ -1.81
NEDD4-211ENST00000514893 UBXN6Q9BZV1 441 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 FAM118AQ9NWS6 357 aa3.72□□□□□ -1.81
NEDD4-211ENST00000514893 MID1O15344 667 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 TFPIP10646 304 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 CTPS1P17812 591 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 CENPAP49450 140 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 ZNF876PQ49A33 203 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 ATP13A5Q4VNC0 1218 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 SFTPA2Q8IWL1 248 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 C18orf8Q96DM3 657 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 CLPBQ9H078 707 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 CXorf56Q9H5V9 222 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 CERS4Q9HA82 394 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 SEPSECSQ9HD40 501 aaKnown RBP3.71□□□□□ -1.82
NEDD4-211ENST00000514893 ATP8A2Q9NTI2 1148 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 NLKQ9UBE8 527 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 KCNS2Q9ULS6 477 aa3.71□□□□□ -1.82
NEDD4-211ENST00000514893 C19orf53Q9UNZ5 99 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-211ENST00000514893 TP53BP1Q12888 1972 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-211ENST00000514893 RASA4O43374 803 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 PCDH7O60245 1069 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 RFPL2O75678 378 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 WEE2P0C1S8 567 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 ARSAP15289 507 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 PITX1P78337 314 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-211ENST00000514893 GRIK2Q13002 908 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 RUNDC3AQ59EK9 446 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 ZNF484Q5JVG2 852 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 CCNI2Q6ZMN8 369 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-211ENST00000514893 MON1AQ86VX9 555 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 OR2C3Q8N628 320 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 DEPTORQ8TB45 409 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 NCSTNQ92542 709 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 YME1L1Q96TA2 773 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 RTKNQ9BST9 563 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 SPATS2LQ9NUQ6 558 aaKnown RBP3.7□□□□□ -1.82
NEDD4-211ENST00000514893 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 TMEM160Q9NX00 188 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 OGFRQ9NZT2 677 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 NDUFAF4Q9P032 175 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 PCDHGB2Q9Y5G2 931 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 CLDN16Q9Y5I7 305 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 RNF215Q9Y6U7 377 aa3.7□□□□□ -1.82
NEDD4-211ENST00000514893 ZIC3O60481 467 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 CRLF1O75462 422 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 CDH1P12830 882 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 STX2P32856 288 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 GJC1P36383 396 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 CSRP3P50461 194 aa3.69□□□□□ -1.82
NEDD4-211ENST00000514893 HDAC4P56524 1084 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms