RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
CDH6-205ENST00000514738 MARCOQ9UEW3 520 aaPredicted RBP16.4■□□□□ 0.22
CDH6-205ENST00000514738 UBE4BO95155 1302 aa16.4■□□□□ 0.22
CDH6-205ENST00000514738 MROH5Q6ZUA9 1318 aa16.4■□□□□ 0.22
CDH6-205ENST00000514738 CIB4A0PJX0 185 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 PMS2P1A4D2B8 440 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 SLC9B1P1A6NJY1 282 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 STX16-NPEPL1H3BU86 382 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 KLF11O14901 512 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 UGT2B11O75310 529 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 KRT1P04264 644 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 FGFR3P22607 806 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 IL12RB1P42701 662 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 GABREP78334 506 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 TTC38Q5R3I4 469 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 MPP7Q5T2T1 576 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 SEL1L2Q5TEA6 688 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 RHOUQ7L0Q8 258 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 CHST15Q7LFX5 561 aaPredicted RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 TFB1MQ8WVM0 346 aaKnown RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 SLCO2A1Q92959 643 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 TRIM43Q96BQ3 446 aaPredicted RBP16.39■□□□□ 0.22
CDH6-205ENST00000514738 CNDP1Q96KN2 507 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 ARMT1Q9H993 441 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 SPC25Q9HBM1 224 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 ZDHHC4Q9NPG8 344 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 ENTPD4Q9Y227 616 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 HSPE1-MOB4S4R3N1 261 aa16.39■□□□□ 0.22
CDH6-205ENST00000514738 TNRQ92752 1358 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 A0A1B0GTQ1 180 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 SAGE2PA6NJ88 616 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 DBX1A6NMT0 343 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 JUNBP17275 347 aaPredicted RBP16.39■□□□□ 0.21
CDH6-205ENST00000514738 ALOX12P18054 663 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 HOXA6P31267 233 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 PDE12Q6L8Q7 609 aaKnown RBP16.39■□□□□ 0.21
CDH6-205ENST00000514738 FRMD7Q6ZUT3 714 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 OR8K5Q8NH50 307 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 RFFLQ8WZ73 363 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 SIPA1Q96FS4 1042 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 ITM2CQ9NQX7 267 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 MFHAS1Q9Y4C4 1052 aa16.39■□□□□ 0.21
CDH6-205ENST00000514738 HACD1B0YJ81 288 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 URODP06132 367 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 RNF224P0DH78 156 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 ATF2P15336 505 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 KCNA5P22460 613 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 SUSD1Q6UWL2 747 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 C5orf46Q6UWT4 87 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 PTAR1Q7Z6K3 402 aaPredicted RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 DGKHQ86XP1 1220 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 CHPFQ8IZ52 775 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 UBL4BQ8N7F7 174 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 ALKBH8Q96BT7 664 aaKnown RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 LHPPQ9H008 270 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 LRRC19Q9H756 370 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 EFCAB1Q9HAE3 211 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 HPF1Q9NWY4 346 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 TSPOAP1O95153 1857 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 LOC100653049A0A140TA62 436 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 ABCB7O75027 752 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 KRT34O76011 436 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 DEXIO95424 95 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 ENO3P13929 434 aaPredicted RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 XRCC1P18887 633 aaPredicted RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 ETV4P43268 484 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 KCNJ5P48544 419 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 DMC1Q14565 340 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 SIX1Q15475 284 aaPredicted RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 TSC22D1Q15714 1073 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 PSMD5Q16401 504 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 RAB7BQ96AH8 199 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 LRRC39Q96DD0 335 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 MYH9P35579 1960 aaKnown RBP16.38■□□□□ 0.21
CDH6-205ENST00000514738 CHD1O14646 1710 aa16.38■□□□□ 0.21
CDH6-205ENST00000514738 AP3D1O14617 1153 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 CDK1P06493 297 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
CDH6-205ENST00000514738 HK1P19367 917 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 RAC1P63000 192 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 POU5F1BQ06416 359 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 GRIK2Q13002 908 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 GPR68Q15743 365 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
CDH6-205ENST00000514738 NXNL2Q5VZ03 156 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms