RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 RSPRY1Q96DX4 576 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 WDR83Q9BRX9 315 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 CHRAC1Q9NRG0 131 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 PIH1D1Q9NWS0 290 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 NSMCE4AQ9NXX6 385 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 TXNDC16Q9P2K2 825 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 LHX3Q9UBR4 397 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 ZNF180Q9UJW8 692 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 INTS6Q9UL03 887 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 RPL26L1Q9UNX3 145 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 PLA2G4CQ9UP65 541 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 RAI2Q9Y5P3 530 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 RRP9O43818 475 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 KRT38O76015 456 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 CRTAMO95727 393 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 GSRP00390 522 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 MT-CO1P00395 513 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 CYP17A1P05093 508 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 KRT15P19012 456 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 MAGOHP61326 146 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 ST8SIA6P61647 398 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 PDE1BQ01064 536 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 BCL2L1Q07817 233 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 FCHO2Q0JRZ9 810 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 RUNX3Q13761 415 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 POU6F1Q14863 301 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 COL19A1Q14993 1142 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 MYLK3Q32MK0 819 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 UBAP2Q5T6F2 1119 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 PDPK2PQ6A1A2 396 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 GRAMD4Q6IC98 578 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 RYBPQ8N488 228 aaPredicted RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 PPM1NQ8N819 430 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 SLC44A1Q8WWI5 657 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 PEX13Q92968 403 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 ZNF669Q96BR6 464 aaPredicted RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 TLCD1Q96CP7 247 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 MSLNLQ96KJ4 702 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 MYADMQ96S97 322 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 TRMT61BQ9BVS5 477 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 ECT2Q9H8V3 914 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 CNOT10Q9H9A5 744 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 PRKAG3Q9UGI9 489 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 FCF1Q9Y324 198 aaKnown RBP16.15■□□□□ 0.18
NUP54-214ENST00000514307 TCAF1Q9Y4C2 921 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 ACTL7BQ9Y614 415 aa16.15■□□□□ 0.18
NUP54-214ENST00000514307 TTC24A2A3L6 582 aaPredicted RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 SRCP12931 536 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 NUMBP49757 651 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 OLIG2Q13516 323 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 DLG2Q15700 870 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 CARD16Q5EG05 197 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 TNFAIP8L3Q5GJ75 292 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 ARMC12Q5T9G4 340 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 ADIPOR2Q86V24 386 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 OR2AP1Q8NGE2 309 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 MTBPQ96DY7 904 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 MRRFQ96E11 262 aaKnown RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 CERS2Q96G23 380 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 PAFAH2Q99487 392 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 DHRS4Q9BTZ2 278 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 CPEB1Q9BZB8 566 aaKnown RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 ATP13A3Q9H7F0 1226 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 C20orf96Q9NUD7 363 aaPredicted RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 HACD3Q9P035 362 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 ZFATQ9P243 1243 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 TBK1Q9UHD2 729 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 CD207Q9UJ71 328 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 RIMKLBQ9ULI2 386 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 ACTL7AQ9Y615 435 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 NUP205Q92621 2012 aa16.14■□□□□ 0.17
NUP54-214ENST00000514307 LAMA2P24043 3122 aaKnown RBP16.14■□□□□ 0.17
NUP54-214ENST00000514307 C2orf81A6NN90 581 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 ANKRD66B4E2M5 251 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 K7ERQ8 282 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 SMAD6O43541 496 aaKnown RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 TULP3O75386 442 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 MT-ND3P03897 115 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 SNRPAP09012 282 aaKnown RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 DLDP09622 509 aaKnown RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 ARSAP15289 507 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 NR1D1P20393 614 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 FCARP24071 287 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 SERPINA4P29622 427 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 RGRP47804 291 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 EPHB1P54762 984 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 CBX1P83916 185 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 THOC5Q13769 683 aaKnown RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 SEPT6Q14141 434 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms