RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ERCC6LQ2NKX8 1250 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 EOGTQ5NDL2 527 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 HIBCHQ6NVY1 386 aaPredicted RBP12.66□□□□□ -0.38
PDPN-210ENST00000513143 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 STK40Q8N2I9 435 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
PDPN-210ENST00000513143 TXNDC5Q8NBS9 432 aaKnown RBP12.66□□□□□ -0.38
PDPN-210ENST00000513143 OR8D1Q8WZ84 308 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 RUBCNQ92622 972 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ART4Q93070 314 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 LRIG1Q96JA1 1093 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 MRGPRX2Q96LB1 330 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 FAM129BQ96TA1 746 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ZDHHC6Q9H6R6 413 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ATP13A3Q9H7F0 1226 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 LRRC40Q9H9A6 602 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDPN-210ENST00000513143 IL36AQ9UHA7 158 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ANAPC5Q9UJX4 755 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 MMP17Q9ULZ9 603 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 WASF2Q9Y6W5 498 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 V9GYY5 206 aaPredicted RBP12.66□□□□□ -0.38
PDPN-210ENST00000513143 LOC285095A0A1B0GVY8 99 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 CHURC1-FNTBB4DL54 471 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SMAPO00193 183 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TRAFD1O14545 582 aaPredicted RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 HTRA2O43464 458 aaPredicted RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 DCXO43602 365 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 SOCS5O75159 536 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 EPOP01588 193 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 CTSLP07711 333 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SERPINA4P29622 427 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 LMAN1P49257 510 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TERF1P54274 439 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TRAF2Q12933 501 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SYCP2LQ5T4T6 812 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 RANBP10Q6VN20 620 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 Q6ZS52 159 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 MCUQ8NE86 351 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TMIEQ8NEW7 156 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 CLDN23Q96B33 292 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 FEM1CQ96JP0 617 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 ZNF641Q96N77 438 aaPredicted RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TDRD1Q9BXT4 1180 aaKnown RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 OSBPL1AQ9BXW6 950 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 FAM129AQ9BZQ8 928 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 PPM1HQ9ULR3 514 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 SHOC2Q9UQ13 582 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
PDPN-210ENST00000513143 PCDHGC4Q9Y5F7 938 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 RAI2Q9Y5P3 530 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 TECTAO75443 2155 aa12.65□□□□□ -0.38
PDPN-210ENST00000513143 STK25O00506 426 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 FZD6O60353 706 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 LEFTY1O75610 366 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 TMEM63AO94886 807 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 PIGNO95427 931 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 AGTP01019 485 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 PRLP01236 227 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 PRNPP04156 253 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 HOXB2P14652 356 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 COL9A1P20849 921 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 CA4P22748 312 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 RPS9P46781 194 aaKnown RBP12.64□□□□□ -0.39
PDPN-210ENST00000513143 CARSP49589 748 aaKnown RBP12.64□□□□□ -0.39
PDPN-210ENST00000513143 CAV1Q03135 178 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 CDK18Q07002 472 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 CUL1Q13616 776 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 STARD3Q14849 445 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 PCSK7Q16549 785 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 NAPEPLDQ6IQ20 393 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 KIAA1211LQ6NV74 962 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 PKN3Q6P5Z2 889 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 GDPD4Q6W3E5 623 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
PDPN-210ENST00000513143 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
PDPN-210ENST00000513143 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 OR2T3Q8NH03 318 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms