RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PSME2Q9UL46 239 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 AZIN1O14977 448 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 MTA2O94776 668 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
COL11A1-210ENST00000512756 SPIRE1Q08AE8 756 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 PTPRNQ16849 979 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 CYP20A1Q6UW02 462 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 DEPDC4Q8N2C3 294 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 Q96MT0 163 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 SEMA3CQ99985 751 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 PCDH18Q9HCL0 1135 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 CRNNQ9UBG3 495 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-210ENST00000512756 TBC1D30Q9Y2I9 924 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-210ENST00000512756 MAGEC1O60732 1142 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 TNNI3P19429 210 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 SMIM11AP58511 58 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 ECM1Q16610 540 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-210ENST00000512756 ZNF618Q5T7W0 954 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 CD101Q93033 1021 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 MYDGFQ969H8 173 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 RCN3Q96D15 328 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-210ENST00000512756 LRRC4CQ9HCJ2 640 aa12.57□□□□□ -0.4
COL11A1-210ENST00000512756 ABLIM1O14639 778 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 FGF1P05230 155 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TPSB2P20231 275 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 JAK1P23458 1154 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 VGLL4Q14135 290 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TPSAB1Q15661 275 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 EIF3MQ7L2H7 374 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 C10orf107Q8IVU9 208 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 DNAJB14Q8TBM8 379 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 MARK4Q96L34 752 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TMEM109Q9BVC6 243 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 RHOJQ9H4E5 214 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CORO1CQ9ULV4 474 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 A0A1W2PPM1 405 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 BBIP1A8MTZ0 92 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ZMPSTE24O75844 475 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 RIPK1Q13546 671 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SH3BP5LQ7L8J4 393 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ANKRD49Q8WVL7 239 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 KREMEN1Q96MU8 473 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SPATA5L1Q9BVQ7 753 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SLC39A8Q9C0K1 460 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 GMPPBQ9Y5P6 360 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TSC22D2O75157 780 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 COL6A2P12110 1019 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CRHR1P34998 444 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CRATP43155 626 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 POLD2P49005 469 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 MRPS6P82932 125 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 TATDN1Q6P1N9 297 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CERS5Q8N5B7 392 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 PCDHB18PQ96TA0 734 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ATP13A3Q9H7F0 1226 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 C8orf4Q9NR00 106 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 DHRS12A0PJE2 317 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 H7C0S8 307 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 B4GALT4O60513 344 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 AMHP03971 560 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 IL6P05231 212 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 LPOP22079 712 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 EPHA3P29320 983 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 IDH2P48735 452 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 HSPA14Q0VDF9 509 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 RGS21Q2M5E4 152 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SLC25A52Q3SY17 297 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CACTIN-AS1Q8N1I8 211 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ZFP28Q8NHY6 868 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 PPP1R16AQ96I34 528 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 OMDQ99983 421 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 GINS4Q9BRT9 223 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 NOL6Q9H6R4 1146 aaKnown RBP12.56□□□□□ -0.4
COL11A1-210ENST00000512756 PRDM4Q9UKN5 801 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 ITGB1BP2Q9UKP3 347 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 CHKBQ9Y259 395 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 BTBD3Q9Y2F9 522 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms