RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 ARCN1P48444 511 aaKnown RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 SERPINH1P50454 418 aaKnown RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 CLCN5P51795 746 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 KPNA1P52294 538 aaPredicted RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 WNT3AP56704 352 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 SMARCB1Q12824 385 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 KLF10Q13118 480 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 PPIGQ13427 754 aaKnown RBP eCLIP9.53□□□□□ -0.88
SUB1-209ENST00000511615 CUL3Q13618 768 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 BLMHQ13867 455 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 SEPT6Q14141 434 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 MARC1Q5VT66 337 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 TRIM68Q6AZZ1 485 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 NEPROQ6NW34 567 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 ESRP1Q6NXG1 681 aaKnown RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 IRGCQ6NXR0 463 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 KLC3Q6P597 504 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 C16orf89Q6UX73 402 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 ADGRG6Q86SQ4 1221 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 ACTRT2Q8TDY3 377 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 KCTD4Q8WVF5 259 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 SLC39A13Q96H72 371 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 MRGPRX2Q96LB1 330 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 SERPINI1Q99574 410 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 SP110Q9HB58 689 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 NMUR1Q9HB89 426 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 TREX1Q9NSU2 369 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 TMEM248Q9NWD8 314 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 NMRK1Q9NWW6 199 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 CLIC5Q9NZA1 410 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 CPSF2Q9P2I0 782 aaKnown RBP9.53□□□□□ -0.88
SUB1-209ENST00000511615 SLC7A8Q9UHI5 535 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 FBXO5Q9UKT4 447 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 CDYLQ9Y232 598 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 LRCH1Q9Y2L9 728 aa9.53□□□□□ -0.88
SUB1-209ENST00000511615 A0A088AWK7 358 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 TRPC5OSA6NMA1 111 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 MATN2O00339 956 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 PHGDHO43175 533 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 TBX10O75333 385 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 PIGNO95427 931 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 ITGB1P05556 798 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 RBP1P09455 135 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 SLC35E2BP0CK96 405 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 ANPEPP15144 967 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 HOXB8P17481 243 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 GLDCP23378 1020 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 ATP5F1P24539 256 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 YWHAQP27348 245 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 DNAJB13P59910 316 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 WDR5P61964 334 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 SLC25A3Q00325 362 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 TNK2Q07912 1038 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 ITKQ08881 620 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 USP4Q13107 963 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 HERC3Q15034 1050 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 CNGA3Q16281 694 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 FAM83EQ2M2I3 478 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 AGAP9Q5VTM2 703 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 KDELC1Q6UW63 502 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 NAPRTQ6XQN6 538 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 TMC7Q7Z402 723 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 GALNT7Q86SF2 657 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 C14orf80Q86SX3 495 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 LRRC43Q8N309 656 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 FSTL5Q8N475 847 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.52□□□□□ -0.89
SUB1-209ENST00000511615 CPSF7Q8N684 471 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 RP9Q8TA86 221 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 DTX3LQ8TDB6 740 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 IMP4Q96G21 291 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 CNDP1Q96KN2 507 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 BTN2A3PQ96KV6 586 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 PANX3Q96QZ0 392 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 VCXQ9H320 206 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 EML4Q9HC35 981 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 OSER1Q9NX31 292 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 NCKIPSDQ9NZQ3 722 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 PRPF19Q9UMS4 504 aaKnown RBP9.52□□□□□ -0.89
SUB1-209ENST00000511615 TANC1Q9C0D5 1861 aa9.52□□□□□ -0.89
SUB1-209ENST00000511615 CCDC78A2IDD5 438 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 RGSL1A5PLK6 1076 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 MEI4A8MW99 385 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 DCXO43602 365 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 TBC1D4O60343 1298 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 FGBP02675 491 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 OR4Q2P0C623 313 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 CPB1P15086 417 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 FGFR3P22607 806 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 ARRB2P32121 409 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 AVPR1AP37288 418 aa9.51□□□□□ -0.89
SUB1-209ENST00000511615 SLC1A2P43004 574 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms