RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 CYP2U1Q7Z449 544 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 ZSCAN30Q86W11 494 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 SLC35F6Q8N357 371 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 LRRN4Q8WUT4 740 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 VAT1Q99536 393 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 SEMA3CQ99985 751 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 FRMD8P1Q9BZ68 369 aaPredicted RBP13□□□□□ -0.33
COL6A6-203ENST00000511332 SUV39H2Q9H5I1 410 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 KCND1Q9NSA2 647 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 NCDNQ9UBB6 729 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 PCDHGA5Q9Y5G8 931 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 PRR23AA6NEV1 266 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 FAM47DPA6NHR8 397 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 RNF103O00237 685 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 PLK4O00444 970 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 AP1G1O43747 822 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 JCHAINP01591 159 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 RETP07949 1114 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 SERPINF2P08697 491 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 RBP3P10745 1247 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 NFKBIAP25963 317 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 HOXD12P35452 270 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 KIAA0895LQ68EN5 471 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 NEK5Q6P3R8 708 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 NCEH1Q6PIU2 408 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 ARMCX6Q7L4S7 300 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 RABEPKQ7Z6M1 372 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
COL6A6-203ENST00000511332 CAMK1DQ8IU85 385 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 MAIP1Q8WWC4 291 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 VOPP1Q96AW1 172 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 FAM122AQ96E09 287 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 C6orf106Q9H6K1 298 aaPredicted RBP12.99□□□□□ -0.33
COL6A6-203ENST00000511332 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
COL6A6-203ENST00000511332 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3DA0A087WVF3 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3IA0A087WXS9 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3KA0A087X1G2 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3FA6NER0 549 aaPredicted RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 METTL12A8MUP2 240 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 UPK3BL1B0FP48 263 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3LB9A6J9 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 UPK3BL2E5RIL1 263 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ENC1O14682 589 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 LRP3O75074 770 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 GJB3O75712 270 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 FSBPO95073 299 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 CPP00450 1065 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3HP0C7X1 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PTPN3P26045 913 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 NUDT1P36639 197 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PLA2G5P39877 138 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PTGER3P43115 390 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 CCR5P51681 352 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 POLR2LP62875 67 aaKnown RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 DSC2Q02487 901 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 CREB5Q02930 508 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ELP6Q0PNE2 266 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 SLC14A2Q15849 920 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TEX44Q53QW1 395 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3GQ6DHY5 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3CQ6IPX1 549 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 KIAA1161Q6NSJ0 714 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ERAP2Q6P179 960 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 DARS2Q6PI48 645 aaKnown RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TRIM69Q86WT6 500 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 SLC41A1Q8IVJ1 513 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 TBC1D3Q8IZP1 549 aaPredicted RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 SNX19Q92543 992 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 RUBCNQ92622 972 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ECHDC3Q96DC8 303 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PBKQ96KB5 322 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 AGAP3Q96P47 875 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PHOX2BQ99453 314 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 HINFPQ9BQA5 517 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 CEP41Q9BYV8 373 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 KLHL8Q9P2G9 620 aaPredicted RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 SUSD2Q9UGT4 822 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.98□□□□□ -0.33
COL6A6-203ENST00000511332 PI4KAP42356 2102 aa12.98□□□□□ -0.33
COL6A6-203ENST00000511332 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 NEMP1O14524 444 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TRAFD1O14545 582 aaPredicted RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 HTRA2O43464 458 aaPredicted RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TSPAN6O43657 245 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 CEP104O60308 925 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 FGGP02679 453 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 MPLP40238 635 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 ABL2P42684 1182 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TAS2R38P59533 333 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms