RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SLC39A8Q9C0K1 460 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 CATSPERBQ9H7T0 1116 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 PARVAQ9NVD7 372 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 PNMA8BQ9ULN7 279 aaPredicted RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 AP4E1Q9UPM8 1137 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 MFHAS1Q9Y4C4 1052 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 U3KQA8 63 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 SPTY2D1-AS1A0A0U1RR47 76 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 FFAR2O15552 330 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 FTLP02792 175 aaPredicted RBP16.42■□□□□ 0.22
LMNA-222ENST00000508500 GZMAP12544 262 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 TPI1P60174 286 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 PFN3P60673 137 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 RHOAP61586 193 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.22
LMNA-222ENST00000508500 PARP15Q460N3 678 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 HES3Q5TGS1 186 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 PDCD7Q8N8D1 485 aaKnown RBP16.42■□□□□ 0.22
LMNA-222ENST00000508500 FAM174AQ8TBP5 190 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 IFT43Q96FT9 208 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 CELF6Q96J87 481 aaKnown RBP16.42■□□□□ 0.22
LMNA-222ENST00000508500 BBC3Q96PG8 261 aaPredicted RBP16.42■□□□□ 0.22
LMNA-222ENST00000508500 OSBPL1AQ9BXW6 950 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 PCSK1NQ9UHG2 260 aa16.42■□□□□ 0.22
LMNA-222ENST00000508500 ARHGEF17Q96PE2 2063 aaPredicted RBP16.42■□□□□ 0.22
LMNA-222ENST00000508500 A0A087WV48 116 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 FGF10O15520 208 aaPredicted RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 MMP20O60882 483 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 NEBLO76041 1014 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 PIGNO95427 931 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 IGSF6O95976 241 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 CSF2P04141 144 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 JUPP14923 745 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 MIPP30301 263 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 IGFALSP35858 605 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 RGRP47804 291 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 PAPOLAP51003 745 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 INSM1Q01101 510 aaPredicted RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 ILKQ13418 452 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 ERMARDQ5T6L9 678 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 AFMIDQ63HM1 303 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 TTC7BQ86TV6 843 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 ZSWIM9Q86XI8 627 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 DCP2Q8IU60 420 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 ARHGAP12Q8IWW6 846 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 NSMCE3Q96MG7 304 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 CPEB1Q9BZB8 566 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 DHX35Q9H5Z1 703 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 MBNL1Q9NR56 388 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 DNAJC28Q9NX36 388 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 DKK3Q9UBP4 350 aa16.41■□□□□ 0.22
LMNA-222ENST00000508500 CNOT8Q9UFF9 292 aaKnown RBP16.41■□□□□ 0.22
LMNA-222ENST00000508500 EEF2KO00418 725 aaKnown RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 FPGTO14772 594 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 PRAMEF11O60813 436 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 LRCH4O75427 683 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 CDK4P11802 303 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 NME1P15531 152 aaKnown RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 TCF4P15884 667 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 ERCC2P18074 760 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 HTR7P34969 479 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 PBX1P40424 430 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 RABIFP47224 123 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 NDST2P52849 883 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 SGCGQ13326 291 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 FILIP1LQ4L180 1135 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 ARHGAP36Q6ZRI8 547 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 NPWQ8N729 165 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 DENND6BQ8NEG7 585 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 FNIP1Q8TF40 1166 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 RFFLQ8WZ73 363 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 APOLD1Q96LR9 279 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
LMNA-222ENST00000508500 TCEAL2Q9H3H9 227 aaPredicted RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 UBA2Q9UBT2 640 aaPredicted RBP16.4■□□□□ 0.22
LMNA-222ENST00000508500 TSPAN11A1L157 253 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 K7ESM1 405 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 NEMP1O14524 444 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 SCAMP1O15126 338 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 IL1R2P27930 398 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 TMEM52BQ4KMG9 183 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 NYAP1Q6ZVC0 841 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 PARGQ86W56 976 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 GAS2L3Q86XJ1 694 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.21
LMNA-222ENST00000508500 ZNF548Q8NEK5 533 aaPredicted RBP16.39■□□□□ 0.21
LMNA-222ENST00000508500 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 WRAP53Q9BUR4 548 aaKnown RBP16.39■□□□□ 0.21
LMNA-222ENST00000508500 EDEM3Q9BZQ6 932 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms