RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TNK1Q13470 666 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 COTL1Q14019 142 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 PPA1Q15181 289 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 HLFQ16534 295 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CYP1B1Q16678 543 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 RUNDC3AQ59EK9 446 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TCTE1Q5JU00 501 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 GPR107Q5VW38 600 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 KRT40Q6A162 431 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 ELP2Q6IA86 826 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TMEM132EQ6IEE7 984 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TMEM81Q6P7N7 255 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 FOXR2Q6PJQ5 311 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TFAP2EQ6VUC0 442 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 BBS12Q6ZW61 710 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 USP49Q70CQ1 688 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CDH24Q86UP0 819 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CPNE9Q8IYJ1 553 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 UBQLNLQ8IYU4 475 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 NLGN1Q8N2Q7 840 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 ARFGAP1Q8N6T3 406 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CMASQ8NFW8 434 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 OR7G3Q8NG95 312 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 FUBP1Q96AE4 644 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CHFRQ96EP1 664 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 MAGEB10Q96LZ2 347 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 NMUR2Q9GZQ4 415 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 GMPR2Q9P2T1 348 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 NXF1Q9UBU9 619 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 VPS28Q9UK41 221 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 PACSIN2Q9UNF0 486 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 KCNK7Q9Y2U2 307 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TNPO3Q9Y5L0 923 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 TRPV2Q9Y5S1 764 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 SNX13Q9Y5W8 968 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 HSPE1-MOB4S4R3N1 261 aa10.91□□□□□ -0.66
PDLIM5-210ENST00000508216 MTMR11A4FU01 709 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 LOC110117498-PIK3R3F6TDL0 507 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 hCG_1984214I3L0E3 225 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC7A4O43246 635 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 DFNA5O60443 496 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CRTAPO75718 401 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 FABP1P07148 127 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 IFNAR1P17181 557 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CKMT2P17540 419 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 EIF2DP41214 584 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 EIF1P41567 113 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CCNA1P78396 465 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CDH17Q12864 832 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 SETMARQ53H47 684 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 FBXO48Q5FWF7 155 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 XKR3Q5GH77 459 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 PDPK2PQ6A1A2 396 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 TIGD3Q6B0B8 471 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CFAP161Q6P656 301 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 TMEM26Q6ZUK4 368 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 THNSL1Q8IYQ7 743 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 OR8H2Q8N162 312 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CRYBG2Q8N1P7 616 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 TMIEQ8NEW7 156 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 PHF10Q8WUB8 498 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 ATOH1Q92858 354 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 COPS5Q92905 334 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 NXPE2Q96DL1 559 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 ZC3H10Q96K80 434 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 CLPTM1LQ96KA5 538 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC13A1Q9BZW2 595 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 ADAMTS10Q9H324 1103 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 FOXP1Q9H334 677 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 STN1Q9H668 368 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 LDAHQ9H6V9 325 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 NIPAL2Q9H841 368 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 TMEM216Q9P0N5 145 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 FETUBQ9UGM5 382 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 PCDHB5Q9Y5E4 795 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 NWD1Q149M9 1564 aa10.9□□□□□ -0.66
PDLIM5-210ENST00000508216 COL15A1P39059 1388 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A1B0GTW7 788 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A1W2PRG0 241 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 NT5C1B-RDH14C9J2C7 533 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 ARHGEF9O43307 516 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PRKD3O94806 890 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 APOL3O95236 402 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 HTR3BO95264 441 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 DHFRP00374 187 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 CDK1P06493 297 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PROS1P07225 676 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 SERPINA6P08185 405 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 SMIM6P0DI80 62 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 IL7P13232 177 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 CCND2P30279 289 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 GRK3P35626 688 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 YAP1P46937 504 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms