RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RPN1P04843 607 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 RRM1P23921 792 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CD1CP29017 333 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 HOXD13P35453 343 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 IGFALSP35858 605 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 LONP1P36776 959 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 TSPAN7P41732 249 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 STAT5AP42229 794 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 LIMK2P53671 638 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 AP3M2P53677 418 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CHAF1BQ13112 559 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 NNTQ13423 1086 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 SEMA5AQ13591 1074 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 HLTFQ14527 1009 aaKnown RBP eCLIP7.32□□□□□ -1.24
VCAN-207ENST00000507162 ALG11Q2TAA5 492 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 RRAGBQ5VZM2 374 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 MYO7BQ6PIF6 2116 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 OGFOD3Q6PK18 319 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CEACAM20Q6UY09 585 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CCDC65Q8IXS2 484 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 Q8NA96 180 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 ANKRD52Q8NB46 1076 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 GLIS1Q8NBF1 620 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 DENND6BQ8NEG7 585 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 TATDN2Q93075 761 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CENPTQ96BT3 561 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 FCRL2Q96LA5 508 aaPredicted RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 TEFMQ96QE5 360 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 FEM1AQ9BSK4 669 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 PANK2Q9BZ23 570 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 TNKS2Q9H2K2 1166 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 MBNL1Q9NR56 388 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 COPG2Q9UBF2 871 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 CROTQ9UKG9 612 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ZSCAN5CA6NGD5 496 aaPredicted RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 BHMG1C9JSJ3 638 aaPredicted RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 F5H5T6 163 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 TGFB1I1O43294 461 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 EPB41L2O43491 1005 aaKnown RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 TSPAN6O43657 245 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 DPM1O60762 260 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 MMP20O60882 483 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 HLA-DRAP01903 254 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 SRCP12931 536 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 CD99P14209 185 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 COX6B1P14854 86 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ITGA3P26006 1051 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 HTR1BP28222 390 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 L1CAMP32004 1257 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 MAN1A1P33908 653 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 PIK3CAP42336 1068 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 NEK4P51957 841 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 MAZP56270 477 aaKnown RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 INCA1Q0VD86 236 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 TRA2AQ13595 282 aaKnown RBP eCLIP7.31□□□□□ -1.24
VCAN-207ENST00000507162 SMTNL2Q2TAL5 461 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 GOLGA7BQ2TAP0 167 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ZC3H12AQ5D1E8 599 aaKnown RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 DPY19L3Q6ZPD9 716 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 APLFQ8IW19 511 aaPredicted RBP7.31□□□□□ -1.24
VCAN-207ENST00000507162 ESX1Q8N693 406 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 UBA3Q8TBC4 463 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 PARD3BQ8TEW8 1205 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 TAF4BQ92750 862 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 MUC3BQ9H195 1237 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 CYP3A43Q9HB55 503 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 APMAPQ9HDC9 416 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ACSS2Q9NR19 701 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 TMEM9Q9P0T7 183 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 KLQ9UEF7 1012 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 OSGIN2Q9Y236 505 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ITM2BQ9Y287 266 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 ZNF451Q9Y4E5 1061 aa7.31□□□□□ -1.24
VCAN-207ENST00000507162 FN1P02751 2386 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 TMEM110-MUSTN1A8MSY1 372 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 XPO1O14980 1071 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 SMAD6O43541 496 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 AP1G1O43747 822 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 PRICKLE3O43900 615 aaPredicted RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 SNAP91O60641 907 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 FAM155BO75949 473 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 ASS1P00966 412 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 HNRNPH3P31942 346 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 CASP14P31944 242 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 PTGER4P35408 488 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 STAT1P42224 750 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 RGS7P49802 495 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 ITGA1P56199 1179 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 HDAC4P56524 1084 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 DAOAP59103 153 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 KRTAP10-9P60411 292 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 DLG4P78352 724 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 KRT83P78385 493 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms