RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 LRRC53A6NM62 1247 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 EEF2KO00418 725 aaKnown RBP14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 DAPK3O43293 454 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 PRPSAP2O60256 369 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 HCAR3P49019 387 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 RPIAP49247 311 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 PEX5P50542 639 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 KLHL30Q0D2K2 578 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 TARDBPQ13148 414 aaKnown RBP eCLIP14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 PDE1CQ14123 709 aaPredicted RBP14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 FGL2Q14314 439 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 FZD2Q14332 565 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 ERAP2Q6P179 960 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 VPS36Q86VN1 386 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 LSMEM2Q8N112 164 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 PYROXD2Q8N2H3 581 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 SDR16C5Q8N3Y7 309 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 DCBLD1Q8N8Z6 715 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 OR6K2Q8NGY2 324 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 WDR48Q8TAF3 677 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 LRRC19Q9H756 370 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 TMEM63CQ9P1W3 806 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 RAXQ9Y2V3 346 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 A0A1B0GTH6 734 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 A0A1W2PQ67 120 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 TSPAN11A1L157 253 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 TMEM191CA6NGB0 347 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 RNF103O00237 685 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 TEX33O43247 280 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 PRAMEF11O60813 436 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 NFKBIAP25963 317 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 PCK1P35558 622 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 RENBPP51606 427 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 POLR2LP62875 67 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 TMEM52BQ4KMG9 183 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 ATXN7L2Q5T6C5 722 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 LRRC69Q6ZNQ3 347 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 ZNF548Q8NEK5 533 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 CENPTQ96BT3 561 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 APOLD1Q96LR9 279 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 DEPDC7Q96QD5 511 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 IL12RB2Q99665 862 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 SUV39H2Q9H5I1 410 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 DHX35Q9H5Z1 703 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 HAUS4Q9H6D7 363 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 ZWILCHQ9H900 591 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 CNOT8Q9UFF9 292 aaKnown RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 ACTL7AQ9Y615 435 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 CACNA1GO43497 2377 aa14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 ANKRD11Q6UB99 2663 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-203ENST00000507004 K7ESM1 405 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 RAD51BO15315 384 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 FFAR2O15552 330 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 RRP8O43159 456 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 AQP9O43315 295 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 MT-CO3P00414 261 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 SERPINC1P01008 464 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 FTLP02792 175 aaPredicted RBP14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 JUNDP17535 347 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 HTR1BP28222 390 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 SERPINA4P29622 427 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 GKP32189 559 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 ACTN2P35609 894 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 INSM1Q01101 510 aaPredicted RBP14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 NSUN2Q08J23 767 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 AGERQ15109 404 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 UGP2Q16851 508 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 BOLA3Q53S33 107 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 MACC1Q6ZN28 852 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 RFX8Q6ZV50 586 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 FSTL5Q8N475 847 aaPredicted RBP14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 NAT6Q93015 286 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 MAGEB5Q9BZ81 275 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 SLC13A1Q9BZW2 595 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 ABCG4Q9H172 646 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 ATP13A3Q9H7F0 1226 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 SP110Q9HB58 689 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 PDFQ9HBH1 243 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 UCKL1Q9NWZ5 548 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 KCTD5Q9NXV2 234 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 LHX3Q9UBR4 397 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 CHD6Q8TD26 2715 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 FRYQ5TBA9 3013 aa14.58□□□□□ -0.08
HMGCS1-203ENST00000507004 TMCO5BA8MYB1 307 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 LZTS3O60299 673 aaPredicted RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 PALMO75781 387 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 GIMD1P0DJR0 217 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 TIMP2P16035 220 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 OGDHQ02218 1023 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 IL10RBQ08334 325 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 LRRC14Q15048 493 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 CYTH1Q15438 398 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 LEKR1Q6ZMV7 388 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 SNIP1Q8TAD8 396 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 SYN2Q92777 582 aaPredicted RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 ZNF653Q96CK0 615 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms