RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KLHL11Q9NVR0 708 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 SEPT3Q9UH03 358 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 PILRBQ9UKJ0 227 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 REXO2Q9Y3B8 237 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 MFHAS1Q9Y4C4 1052 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 HYOU1Q9Y4L1 999 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 DUSP10Q9Y6W6 482 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 A0A1B0GTW7 788 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 APOL1O14791 398 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 BCAT2O15382 392 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 PLRG1O43660 514 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 MAFKO60675 156 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NEBLO76041 1014 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 DKK1O94907 266 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ZIC2O95409 532 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 CTSLP07711 333 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SYPP08247 313 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ITGB7P26010 798 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CD27P26842 260 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 MAOBP27338 520 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 DRD3P35462 400 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NUDT1P36639 197 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 HSPA9P38646 679 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 GARSP41250 739 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 MAPK8P45983 427 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SCNN1BP51168 640 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SUOXP51687 545 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NEK3P51956 506 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ADPRHP54922 357 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 WDR4P57081 412 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 POLR2LP62875 67 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 ARHGAP8P85298 464 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 LMNB2Q03252 620 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 GALNT2Q10471 571 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 HNRNPDQ14103 355 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 ZNF235Q14590 738 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CCDC6Q16204 474 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 POM121L1PQ3SYA9 428 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ZNF805Q5CZA5 627 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 TRIM61Q5EBN2 209 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CFAP58Q5T655 872 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ATXN7L2Q5T6C5 722 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 PEAR1Q5VY43 1037 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 KIAA0895LQ68EN5 471 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NCBP2-AS2Q69YL0 99 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NEK5Q6P3R8 708 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 NCEH1Q6PIU2 408 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ARHGAP36Q6ZRI8 547 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 PRR23CQ6ZRP0 262 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SRLQ86TD4 932 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 TTC7BQ86TV6 843 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 RFX6Q8HWS3 928 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CCDC50Q8IVM0 306 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 KATNAL2Q8IYT4 538 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 PQLC3Q8N755 202 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 UBL4BQ8N7F7 174 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 PAF1Q8N7H5 531 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 TSEN2Q8NCE0 465 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 CCNYQ8ND76 341 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 EXD1Q8NHP7 514 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SNX19Q92543 992 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 RAB7BQ96AH8 199 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SKA1Q96BD8 255 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 BIRC7Q96CA5 298 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ITPKCQ96DU7 683 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 RBM41Q96IZ5 413 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 FEM1CQ96JP0 617 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ZNF641Q96N77 438 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 TSGA13Q96PP4 275 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 PSKH2Q96QS6 385 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 TUBGCP5Q96RT8 1024 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 CPEB1Q9BZB8 566 aaKnown RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SUV39H2Q9H5I1 410 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ATP13A3Q9H7F0 1226 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 PREBQ9HCU5 417 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SERGEFQ9UGK8 458 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 EVLQ9UI08 416 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 SALL4Q9UJQ4 1053 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 AMFRQ9UKV5 643 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.36□□□□□ -1.23
GYPB-206ENST00000506516 PCDHA3Q9Y5H8 950 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 HEY1Q9Y5J3 304 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 FRYLO94915 3013 aa7.36□□□□□ -1.23
GYPB-206ENST00000506516 MUC6Q6W4X9 2439 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.35□□□□□ -1.23
GYPB-206ENST00000506516 A0A1W2PPC4 97 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 A0A1W2PQ67 120 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 MACROD2A1Z1Q3 448 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 C3orf70A6NLC5 250 aaPredicted RBP7.35□□□□□ -1.23
GYPB-206ENST00000506516 C16orf96A6NNT2 1141 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 MIF4GDA9UHW6 222 aaKnown RBP7.35□□□□□ -1.23
GYPB-206ENST00000506516 PLK4O00444 970 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 NEMP1O14524 444 aa7.35□□□□□ -1.23
GYPB-206ENST00000506516 PPP1R12AO14974 1030 aaPredicted RBP7.35□□□□□ -1.23
GYPB-206ENST00000506516 MATN3O15232 486 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms