RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RGRP47804 291 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 NDST2P52849 883 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 TPI1P60174 286 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 INSM1Q01101 510 aaPredicted RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 KLHL30Q0D2K2 578 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 EIF2B5Q13144 721 aaKnown RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 ILKQ13418 452 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 HES3Q5TGS1 186 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 AFMIDQ63HM1 303 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 TP53INP2Q8IXH6 220 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 NSMCE3Q96MG7 304 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 SNRNP25Q9BV90 132 aaKnown RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 ISCUQ9H1K1 167 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 DNAJC28Q9NX36 388 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 DKK3Q9UBP4 350 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 CNOT8Q9UFF9 292 aaKnown RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 U3KQA8 63 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 FAM208BQ5VWN6 2430 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 COL5A1P20908 1838 aaPredicted RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 URB1O60287 2271 aaKnown RBP14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 ACACAQ13085 2346 aa14.57□□□□□ -0.08
CDC42SE2-209ENST00000506419 TRPM6Q9BX84 2022 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 K7ESM1 405 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 IGSF6O95976 241 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 HTR7P34969 479 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 PBX1P40424 430 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 RABIFP47224 123 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 RAD51Q06609 339 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 PDE1CQ14123 709 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 HGSNATQ68CP4 663 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 PPP1R2P3Q6NXS1 205 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 ARHGAP36Q6ZRI8 547 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 ZSWIM9Q86XI8 627 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 HNRNPLLQ8WVV9 542 aaKnown RBP14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 RFFLQ8WZ73 363 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 TCEAL2Q9H3H9 227 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 SUV39H2Q9H5I1 410 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 MYO1AQ9UBC5 1043 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 UBA2Q9UBT2 640 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 LHX6Q9UPM6 363 aa14.56□□□□□ -0.08
CDC42SE2-209ENST00000506419 LRCH4O75427 683 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 SERPINC1P01008 464 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 CKMT1AP12532 417 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 TCF4P15884 667 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 IL1R2P27930 398 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 IGFALSP35858 605 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 HNRNPKP61978 463 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 FANCCQ00597 558 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 SEMG2Q02383 582 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 FIGNQ5HY92 759 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 RFX8Q6ZV50 586 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 LUZP1Q86V48 1076 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 VPS36Q86VN1 386 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 ZSCAN30Q86W11 494 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 CAMK1DQ8IU85 385 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 CACTIN-AS1Q8N1I8 211 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 NPWQ8N729 165 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 FAM181AQ8N9Y4 354 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 TP53I13Q8NBR0 393 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 TSEN2Q8NCE0 465 aaKnown RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 HCAR2Q8TDS4 363 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 APOLD1Q96LR9 279 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 WRAP53Q9BUR4 548 aaKnown RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 NLGN3Q9NZ94 848 aa14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 CWC15Q9P013 229 aaKnown RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 IPO11Q9UI26 975 aaKnown RBP14.55□□□□□ -0.08
CDC42SE2-209ENST00000506419 SMG1Q96Q15 3661 aaKnown RBP14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 TSPAN11A1L157 253 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 SYCE3A1L190 88 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 MUSKO15146 869 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 DAPK3O43293 454 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 PRPSAP2O60256 369 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 GCATO75600 419 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 TM7SF2O76062 418 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 RNF8O76064 485 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 MT-CO3P00414 261 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 PRKCGP05129 697 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 NME1P15531 152 aaKnown RBP14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 JUNDP17535 347 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 HCAR3P49019 387 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 DAB2P98082 770 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 E2F1Q01094 437 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 UGP2Q16851 508 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 KLHL40Q2TBA0 621 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 WSCD2Q2TBF2 565 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 COL28A1Q2UY09 1125 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 PPP6R3Q5H9R7 873 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 SRLQ86TD4 932 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 PARGQ86W56 976 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 DCBLD1Q8N8Z6 715 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 DENND6BQ8NEG7 585 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 ZNF548Q8NEK5 533 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 CXorf40AQ8TE69 158 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 ZNF653Q96CK0 615 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms