RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 CNTN4Q8IWV2 1026 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TRIM42Q8IWZ5 723 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 LRRC34Q8IZ02 419 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 UNC5BQ8IZJ1 945 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 CARNMT1Q8N4J0 409 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 SLC25A41Q8N5S1 370 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TDRD5Q8NAT2 981 aaKnown RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 OR52K2Q8NGK3 314 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 GDAP1Q8TB36 358 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 SHKBP1Q8TBC3 707 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 PEX13Q92968 403 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 GRAMD1AQ96CP6 724 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 IFT43Q96FT9 208 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 CABS1Q96KC9 395 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 KLF6Q99612 283 aaPredicted RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 C17orf80Q9BSJ5 609 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 SLC46A2Q9BY10 475 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 IQCGQ9H095 443 aaKnown RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TASP1Q9H6P5 420 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 IARS2Q9NSE4 1012 aaKnown RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TREX1Q9NSU2 369 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 C20orf96Q9NUD7 363 aaPredicted RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 ZDHHC7Q9NXF8 308 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 CFAP97Q9P2B7 532 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 DNMT3BQ9UBC3 853 aaKnown RBP8.14□□□□□ -1.11
COL4A5-208ENST00000505728 RIMKLBQ9ULI2 386 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
COL4A5-208ENST00000505728 TCP11X1B4DZS4 312 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 GOLGA8RI6L899 631 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CBX4O00257 560 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 MUSKO15146 869 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 GRM6O15303 877 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 TIMM44O43615 452 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ZMPSTE24O75844 475 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 NDST3O95803 873 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CYBBP04839 570 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ITGA2BP08514 1039 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 TAC1P20366 129 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 FOXN2P32314 431 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ETV4P43268 484 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ARCN1P48444 511 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 LIMK2P53671 638 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ZXDBP98169 803 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 SLC20A2Q08357 652 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 GPM6BQ13491 265 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 SLC12A1Q13621 1099 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 THOC5Q13769 683 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CAMK1Q14012 370 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 IHHQ14623 411 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 POU6F1Q14863 301 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CNGA3Q16281 694 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 PCSK7Q16549 785 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 DBN1Q16643 649 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 TSTD2Q5T7W7 516 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 GKAP1Q5VSY0 366 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ESRP1Q6NXG1 681 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 LMNTD2Q8IXW0 634 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CACNA2D3Q8IZS8 1091 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CMTM8Q8IZV2 173 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 KIAA1958Q8N8K9 716 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 DCAF4L2Q8NA75 395 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 FIBINQ8TAL6 211 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 CALML6Q8TD86 181 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 LRRC8CQ8TDW0 803 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 DDI1Q8WTU0 396 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ATP2A3Q93084 1043 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 HLA-CQ95604 372 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ISL2Q96A47 359 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ACDQ96AP0 544 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 ALG14Q96F25 216 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 SEC16BQ96JE7 1060 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 NUDCD1Q96RS6 583 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 RBBP8Q99708 897 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 PAIP2Q9BPZ3 127 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 FEM1AQ9BSK4 669 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 FAM167BQ9BTA0 163 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 LMAN2LQ9H0V9 348 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 RABEP2Q9H5N1 569 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 EPHX3Q9H6B9 360 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 MLXIPLQ9NP71 852 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 MAN1C1Q9NR34 630 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 KIAA1522Q9P206 1035 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 DCDC2Q9UHG0 476 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 GRID1Q9ULK0 1009 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 OR51B4Q9Y5P0 310 aa8.13□□□□□ -1.11
COL4A5-208ENST00000505728 HELZP42694 1942 aaKnown RBP8.13□□□□□ -1.11
COL4A5-208ENST00000505728 MUC6Q6W4X9 2439 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 ANKRD36A6QL64 1941 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 MROH6A6NGR9 719 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 SLC7A4O43246 635 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 GLRA3O75311 464 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 MOSPD3O75425 235 aa8.12□□□□□ -1.11
COL4A5-208ENST00000505728 CD160O95971 181 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms