RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GZMAP12544 262 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 TCF4P15884 667 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 ACP1P24666 158 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 IGFALSP35858 605 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 PAPOLAP51003 745 aaKnown RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 PFN3P60673 137 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 KLHL30Q0D2K2 578 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 EIF2B5Q13144 721 aaKnown RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 ERMARDQ5T6L9 678 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 ARHGAP12Q8IWW6 846 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 NPWQ8N729 165 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 HNRNPLLQ8WVV9 542 aaKnown RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 NSMCE3Q96MG7 304 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 WRAP53Q9BUR4 548 aaKnown RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 TCEAL2Q9H3H9 227 aaPredicted RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 MYO1AQ9UBC5 1043 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 U3KQA8 63 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 SYCE3A1L190 88 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 K7ESM1 405 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 FPGTO14772 594 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 FGF10O15520 208 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-204ENST00000503215 PRAMEF11O60813 436 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 SERPINC1P01008 464 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 PRKCGP05129 697 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 IL1R2P27930 398 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 PDE1CQ14123 709 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-204ENST00000503215 PPP6R3Q5H9R7 873 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-204ENST00000503215 AFMIDQ63HM1 303 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 ZSWIM9Q86XI8 627 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 CASKIN2Q8WXE0 1202 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 ZNF653Q96CK0 615 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 IFT43Q96FT9 208 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 APOLD1Q96LR9 279 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 DKK3Q9UBP4 350 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 DKK4Q9UBT3 224 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 COQ6Q9Y2Z9 468 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 MYLKQ15746 1914 aa16.44■□□□□ 0.22
SCLT1-204ENST00000503215 ASXL3Q9C0F0 2248 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 SCAMP1O15126 338 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 LRCH4O75427 683 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 CSF2P04141 144 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 NME1P15531 152 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 ERCC2P18074 760 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 RABIFP47224 123 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 NDST2P52849 883 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 DAB2P98082 770 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 RAD51Q06609 339 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 ILKQ13418 452 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 COL28A1Q2UY09 1125 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 CAMK1DQ8IU85 385 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 RBFAQ8N0V3 343 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 TSEN2Q8NCE0 465 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 ZNF548Q8NEK5 533 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 ASB12Q8WXK4 309 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 CPEB1Q9BZB8 566 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 IPO11Q9UI26 975 aaKnown RBP16.43■□□□□ 0.22
SCLT1-204ENST00000503215 NBEAQ8NFP9 2946 aa16.43■□□□□ 0.22
SCLT1-204ENST00000503215 ADAMTS20P59510 1910 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 MUSKO15146 869 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 TM7SF2O76062 418 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 JUNDP17535 347 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 PBX1P40424 430 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 FANCCQ00597 558 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 KLHL40Q2TBA0 621 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 TXNRD3NBQ6F5E7 133 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 PARGQ86W56 976 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 TP53I13Q8NBR0 393 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-204ENST00000503215 FAM174AQ8TBP5 190 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 FNIP1Q8TF40 1166 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 RFFLQ8WZ73 363 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 BTBD6Q96KE9 485 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 ISCUQ9H1K1 167 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 SUV39H2Q9H5I1 410 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 PCDH12Q9NPG4 1184 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 NLGN3Q9NZ94 848 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 ITPR1Q14643 2758 aa16.42■□□□□ 0.22
SCLT1-204ENST00000503215 TTC24A2A3L6 582 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-204ENST00000503215 DFFAO00273 331 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CASC3O15234 703 aaKnown RBP16.41■□□□□ 0.22
SCLT1-204ENST00000503215 DAPK3O43293 454 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 GCATO75600 419 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 RNF8O76064 485 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CDK4P11802 303 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 CKMT1AP12532 417 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 HTR7P34969 479 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 HNF1BP35680 557 aa16.41■□□□□ 0.22
SCLT1-204ENST00000503215 HNRNPKP61978 463 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCLT1-204ENST00000503215 C1orf61Q13536 156 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms