RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DNTTP04053 509 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 MMP2P08253 660 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GABRG2P18507 467 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 NDUFV2P19404 249 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 FDFT1P37268 417 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 CCR3P51677 355 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 METAP1P53582 386 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GEMP55040 296 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 SKOR1P84550 965 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GRM3Q14832 879 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 TTC31Q49AM3 519 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 ARSIQ5FYB1 569 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 TEX35Q5T0J7 233 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GDPD4Q6W3E5 623 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 SYDE1Q6ZW31 735 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 CAMK1DQ8IU85 385 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 FBXL6Q8N531 539 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 LRRN4CLQ8ND94 238 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 LRRC45Q96CN5 670 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 FCRL5Q96RD9 977 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 MLPHQ9BV36 600 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 FICDQ9BVA6 458 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 OSBPL1AQ9BXW6 950 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GOLGA6AQ9NYA3 693 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 DLGAP2Q9P1A6 1054 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 FAM153AQ9UHL3 310 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 RAI2Q9Y5P3 530 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 THADAQ6YHU6 1953 aa13.71□□□□□ -0.22
CPNE1-227ENST00000498056 FAM187AA6NFU0 413 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 MID1O15344 667 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 SOCS5O75159 536 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 ALDH1A2O94788 518 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 CES1P23141 567 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 CLCN5P51795 746 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 MPP3Q13368 585 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 GALNT3Q14435 633 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 LRRC73Q5JTD7 316 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 FAM46CQ5VWP2 391 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 C4orf22Q6V702 233 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 PARS2Q7L3T8 475 aaKnown RBP13.7□□□□□ -0.22
CPNE1-227ENST00000498056 KDELC2Q7Z4H8 507 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 MAATS1Q7Z4T9 603 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 PRPF39Q86UA1 669 aaKnown RBP13.7□□□□□ -0.22
CPNE1-227ENST00000498056 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 LPCAT1Q8NF37 534 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 MDGA1Q8NFP4 955 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 GANCQ8TET4 914 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
CPNE1-227ENST00000498056 IFT43Q96FT9 208 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 NSMCE3Q96MG7 304 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 KLHL32Q96NJ5 620 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 FAM129BQ96TA1 746 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
CPNE1-227ENST00000498056 TPSD1Q9BZJ3 242 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 DPH5Q9H2P9 285 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
CPNE1-227ENST00000498056 AAR2Q9Y312 384 aaKnown RBP13.7□□□□□ -0.22
CPNE1-227ENST00000498056 ZNF318Q5VUA4 2279 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 A0A1W2PP55 124 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 EFCAB8A8MWE9 144 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 PLK4O00444 970 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 HEXIM1O94992 359 aaKnown RBP13.69□□□□□ -0.22
CPNE1-227ENST00000498056 APBB3O95704 486 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 APRTP07741 180 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ACADMP11310 421 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 XPAP23025 273 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ITGB7P26010 798 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ADCY8P40145 1251 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 CXCL12P48061 93 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 EPHB1P54762 984 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 WNT3AP56704 352 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 RPS14P62263 151 aaKnown RBP13.69□□□□□ -0.22
CPNE1-227ENST00000498056 OLIG2Q13516 323 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 SEMA5AQ13591 1074 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 SPARCL1Q14515 664 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ARMC12Q5T9G4 340 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 IZUMO3Q5VZ72 239 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 MMGT1Q8N4V1 131 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
CPNE1-227ENST00000498056 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 SIPA1Q96FS4 1042 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 LRIG1Q96JA1 1093 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 MRGPRX1Q96LB2 322 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms