RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 KNSTRNQ9Y448 316 aa2.6□□□□□ -1.99
CKS1BP2-201ENST00000497342 CLDN16Q9Y5I7 305 aa2.6□□□□□ -1.99
CKS1BP2-201ENST00000497342 KCNE2Q9Y6J6 123 aa2.6□□□□□ -1.99
CKS1BP2-201ENST00000497342 FAM169AQ9Y6X4 670 aa2.6□□□□□ -1.99
CKS1BP2-201ENST00000497342 CENPJQ9HC77 1338 aaPredicted RBP2.6□□□□□ -1.99
CKS1BP2-201ENST00000497342 DDX60Q8IY21 1712 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CACNA1IQ9P0X4 2223 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CLRN2A0PK11 232 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 UBE2QL1A1L167 161 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 FAM181BA6NEQ2 426 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 C17orf100A8MU93 164 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PEX12O00623 359 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CLGNO14967 610 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PAPSS1O43252 624 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 STC2O76061 302 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 WNT11O96014 354 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 URODP06132 367 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CHRM4P08173 479 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SELLP14151 372 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 HGFP14210 728 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ITGALP20701 1170 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CYP2B6P20813 491 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 MATN1P21941 496 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PRKAR1BP31321 381 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 HNF1BP35680 557 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 GGT5P36269 586 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PBX1P40424 430 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 GABRB2P47870 512 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PCP4P48539 62 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 RCAN1P53805 252 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 HDAC4P56524 1084 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 BPIFB3P59826 476 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 EIF4A1P60842 406 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 UFM1P61960 85 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 OLR1P78380 273 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PPATQ06203 517 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 AIMP1Q12904 312 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 DCTN2Q13561 401 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 DOC2BQ14184 412 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SHBQ15464 509 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 NTRK2Q16620 822 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 NFIL3Q16649 462 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TYSND1Q2T9J0 566 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 C15orf59Q2T9L4 293 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TTC31Q49AM3 519 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 KRTCAP3Q53RY4 240 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZNF569Q5MCW4 686 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZNF648Q5T619 568 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 LRCH2Q5VUJ6 765 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 KRT79Q5XKE5 535 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 EFCAB12Q6NXP0 572 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CDC73Q6P1J9 531 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TMEM154Q6P9G4 183 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TMEM88Q6PEY1 159 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 DCLRE1AQ6PJP8 1040 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 LAYNQ6UX15 382 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TMEM108Q6UXF1 575 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 MICALCLQ6ZW33 695 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 RALYLQ86SE5 291 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 GALNT7Q86SF2 657 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZSWIM9Q86XI8 627 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 LAS2Q8IYD9 372 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TEX11Q8IYF3 940 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 IZUMO1Q8IYV9 350 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 MAML2Q8IZL2 1156 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 OR8H3Q8N146 312 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TMEM199Q8N511 208 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 METTL25Q8N6Q8 603 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TXNDC5Q8NBS9 432 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 KCTD6Q8NC69 237 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TMEM116Q8NCL8 245 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 C11orf65Q8NCR3 313 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SHCBP1Q8NEM2 672 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 OR52L2PQ8NGH6 319 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TBC1D16Q8TBP0 767 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SH3RF3Q8TEJ3 882 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 PIGOQ8TEQ8 1089 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 RSPH1Q8WYR4 309 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 POMGNT1Q8WZA1 660 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ST8SIA2Q92186 375 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ARRDC3Q96B67 414 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 RNFT2Q96EX2 444 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 BOD1Q96IK1 185 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 COG3Q96JB2 828 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SPATA17Q96L03 361 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 RPL10LQ96L21 214 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 HAPLN3Q96S86 360 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SPATA25Q9BR10 227 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SEZ6LQ9BYH1 1024 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 KRTAP17-1Q9BYP8 105 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 TTYH3Q9C0H2 523 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CDCP1Q9H5V8 836 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CCDC134Q9H6E4 229 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 VEZTQ9HBM0 779 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SIRT5Q9NXA8 310 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SELENONQ9NZV5 590 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 NTMQ9P121 344 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 WDR35Q9P2L0 1181 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 DKK2Q9UBU2 259 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SEL1LQ9UBV2 794 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms