RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MAP3K7O43318 606 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 DLX3O60479 287 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 NPHS1O60500 1241 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CCNT2O60583 730 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 KRT34O76011 436 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CNTN5O94779 1100 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 HAPLN1P10915 354 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 HOXD10P28358 340 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 NUMBP49757 651 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ARPP19P56211 112 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 TNK2Q07912 1038 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 IL10RBQ08334 325 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ILF2Q12905 390 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 KLF10Q13118 480 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CUL3Q13618 768 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 MRPL58Q14197 206 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 MGAT5BQ3V5L5 792 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 AGAP9Q5VTM2 703 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 RAP1GAP2Q684P5 730 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 KLC3Q6P597 504 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 AAGABQ6PD74 315 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 PIWIL4Q7Z3Z4 852 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 GALNT7Q86SF2 657 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SETD3Q86TU7 594 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 MFSD6LQ8IWD5 586 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 PSMG2Q969U7 264 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CCDC126Q96EE4 140 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 HHIPL1Q96JK4 782 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CNDP1Q96KN2 507 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 RPRD1AQ96P16 312 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 GPR78Q96P69 363 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 KLHL5Q96PQ7 755 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 COMMD8Q9NX08 183 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 VWA8A3KMH1 1905 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 DRGXA6NNA5 263 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ZBTB14O43829 449 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 TBX18O95935 607 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ALDH2P05091 517 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 THRAP10827 490 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ADSLP30566 484 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 MAPKAPK2P49137 400 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 KPNA1P52294 538 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 PGGT1BP53609 377 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 YBEYP58557 167 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 DNAJB13P59910 316 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 DSC2Q02487 901 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 RING1Q06587 406 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 TAF10Q12962 218 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 LAMB3Q13751 1172 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 RALGPS1Q5JS13 557 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 TMCO4Q5TGY1 634 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CNSTQ6PJW8 725 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 FRMD7Q6ZUT3 714 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 GPR152Q8TDT2 470 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 HEXDCQ8WVB3 486 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 NRG4Q8WWG1 115 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 JADE3Q92613 823 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 IGSF8Q969P0 613 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SPATA17Q96L03 361 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 OR52B2Q96RD2 323 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 OMDQ99983 421 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CCDC28BQ9BUN5 200 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SHCBP1LQ9BZQ2 653 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 POLR1EQ9GZS1 481 aaKnown RBP11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 STARD7Q9NQZ5 370 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 NDE1Q9NXR1 346 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 ZDHHC2Q9UIJ5 367 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 CDH22Q9UJ99 828 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 GOLGA8QA0A0J9YX86 632 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 MTMR11A4FU01 709 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 GOLGA8OA6NCC3 632 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 TRPC5OSA6NMA1 111 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 GOLGA8NF8WBI6 632 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 NEMP1O14524 444 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 SLC7A4O43246 635 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 RBP1P09455 135 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 ANPEPP15144 967 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 ITGAXP20702 1163 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 OR1E1P30953 314 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 PPARGP37231 505 aaPredicted RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 PBX3P40426 434 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 EPHB1P54762 984 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 PRAMEP78395 509 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 BTKQ06187 659 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 TBL3Q12788 808 aaKnown RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 ELAVL2Q12926 359 aaKnown RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 DLG1Q12959 904 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 GPR17Q13304 367 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms