RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PGPEP1LA6NFU8 196 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 NPIPB15A6NHN6 443 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 CD8B2A6NJW9 211 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 ERVV-2B6SEH9 535 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 RNMTO43148 476 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 BAIAP3O94812 1187 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 ALPLP05186 524 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 HSPA1AP0DMV8 641 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 HSPA1BP0DMV9 641 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 MAPK4P31152 587 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 RXRGP48443 463 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 CLDN2P57739 230 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 NANOS2P60321 138 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 YWHAZP63104 245 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 SETQ01105 290 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 ASPHD1Q5U4P2 390 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 DEF8Q6ZN54 512 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 FAM83HQ6ZRV2 1179 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 SLC16A12Q6ZSM3 486 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 TMTC3Q6ZXV5 915 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 SLC46A3Q7Z3Q1 461 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 CTU1Q7Z7A3 348 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 DHX40Q8IX18 779 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 KDM1BQ8NB78 822 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 PERPQ96FX8 193 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 ZC3HAV1LQ96H79 300 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 NR1H4Q96RI1 486 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 GLIS2Q9BZE0 524 aaPredicted RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 RANBP17Q9H2T7 1088 aaKnown RBP4.66□□□□□ -1.66
SMC4-224ENST00000494612 MVB12BQ9H7P6 319 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 MAP6D1Q9H9H5 199 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 PLEKHA5Q9HAU0 1116 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 BRF2Q9HAW0 419 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 MPP6Q9NZW5 540 aa4.66□□□□□ -1.66
SMC4-224ENST00000494612 A0A087X0M5 115 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 A0A096LPK6 155 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 A0A1B0GX30 115 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 C17orf102A2RUQ5 167 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 PRSS47A8MTI9 375 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 TLX3O43711 291 aaPredicted RBP4.65□□□□□ -1.67
SMC4-224ENST00000494612 ATG13O75143 517 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 RNASEH2AO75792 299 aaKnown RBP4.65□□□□□ -1.67
SMC4-224ENST00000494612 CLDN7O95471 211 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 TFPIP10646 304 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 CTPS1P17812 591 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 NFKBIAP25963 317 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 AVPR1AP37288 418 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 PBX3P40426 434 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 GNAQP50148 359 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 RARSP54136 660 aaKnown RBP4.65□□□□□ -1.67
SMC4-224ENST00000494612 DCAF7P61962 342 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 ERV3-1Q14264 604 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 MED22Q15528 200 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 ODF3L2Q3SX64 289 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 MANEAQ5SRI9 462 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 HYIQ5T013 277 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 HEPHL1Q6MZM0 1159 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 C4orf50Q6ZRC1 276 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 TBC1D26Q86UD7 250 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 PDILTQ8N807 584 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 C11orf65Q8NCR3 313 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 SLC25A28Q96A46 364 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 PABPC5Q96DU9 382 aaKnown RBP4.65□□□□□ -1.67
SMC4-224ENST00000494612 ZFYVE19Q96K21 471 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 SIN3AQ96ST3 1273 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 FTOQ9C0B1 505 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMC4-224ENST00000494612 FOXP1Q9H334 677 aaPredicted RBP4.65□□□□□ -1.67
SMC4-224ENST00000494612 SEL1LQ9UBV2 794 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 PCDHA12Q9UN75 941 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 HS3ST3B1Q9Y662 390 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 SLC4A4Q9Y6R1 1079 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 ITIH6Q6UXX5 1313 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 KDM3AQ9Y4C1 1321 aa4.65□□□□□ -1.67
SMC4-224ENST00000494612 CUX2O14529 1486 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 RUSC2Q8N2Y8 1516 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 PI4KAP2A4QPH2 592 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CBY3A6NI87 242 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 HSPB2A8KAH6 182 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 KLRF2D3W0D1 207 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 H0YGN5 161 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CNOT3O75175 753 aaKnown RBP4.64□□□□□ -1.67
SMC4-224ENST00000494612 TIPRLO75663 272 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 RGS11O94810 467 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 ME1P48163 572 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 BLKP51451 505 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CDH12P55289 794 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 PPATQ06203 517 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 GRIK3Q13003 919 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 FRG1Q14331 258 aaKnown RBP4.64□□□□□ -1.67
SMC4-224ENST00000494612 ARHGEF6Q15052 776 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 HSPB2Q16082 182 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 COL28A1Q2UY09 1125 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 WASHC2DQ5SRD0 308 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 PRAMEF19Q5SWL8 479 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 SNX30Q5VWJ9 437 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 ATG9BQ674R7 924 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 ITPRIPL1Q6GPH6 555 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CDC73Q6P1J9 531 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms