RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PEX5P50542 639 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 DNA2P51530 1060 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 HDAC4P56524 1084 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 DEUP1Q05D60 604 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 EFEMP1Q12805 493 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 NME3Q13232 169 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 ADAM15Q13444 863 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 ACAP1Q15027 740 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 RPS6KA1Q15418 735 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 C10orf120Q5SQS8 335 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 SNX30Q5VWJ9 437 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 MSANTD2Q6P1R3 559 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 SCYL2Q6P3W7 929 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 TMC5Q6UXY8 1006 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 GAREM2Q75VX8 874 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 RSRC2Q7L4I2 434 aaKnown RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 BNIPLQ7Z465 357 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 GRASPQ7Z6J2 395 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 TMC8Q8IU68 726 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 NLGN4XQ8N0W4 816 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 AHI1Q8N157 1196 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 ELMOD1Q8N336 334 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 EFHBQ8N7U6 833 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 CHST14Q8NCH0 376 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 DQX1Q8TE96 717 aaKnown RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 FAM172AQ8WUF8 416 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 OVCA2Q8WZ82 227 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 KRT35Q92764 455 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 TCEAL4Q96EI5 215 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 HES6Q96HZ4 224 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 PEBP4Q96S96 227 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 CYP2S1Q96SQ9 504 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 CDCA3Q99618 268 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 NAPGQ99747 312 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-216ENST00000493864 APOL5Q9BWW9 433 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 RNF38Q9H0F5 515 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 ZWILCHQ9H900 591 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 PIGVQ9NUD9 493 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 DDIT4Q9NX09 232 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 CLIC5Q9NZA1 410 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 LCMT1Q9UIC8 334 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 PCDHA3Q9Y5H8 950 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
TRA2B-216ENST00000493864 NOTCH4Q99466 2003 aa6.77□□□□□ -1.32
TRA2B-216ENST00000493864 MUC3AQ02505 3323 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 C2orf78A6NCI8 922 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PI4K2BG5E9Z4 385 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CBX4O00257 560 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 MSI1O43347 362 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 COCHO43405 550 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 TLR5O60602 858 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 SRGAP2O75044 1071 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 MOSPD3O75425 235 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 KRT37O76014 449 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 F9P00740 461 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 IGLV3-25P01717 112 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 TUBB4AP04350 444 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 RHOP08100 348 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 RALAP11233 206 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PFKLP17858 780 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 POU3F2P20265 443 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CTNNA2P26232 953 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 HOXA9P31269 272 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CXCR5P32302 372 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 ADRA1BP35368 520 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PCK1P35558 622 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 GJC1P36383 396 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 ATP5C1P36542 298 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CXCR3P49682 368 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 EPHA5P54756 1037 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 SLC25A11Q02978 314 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 EIF4EBP2Q13542 120 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PABPC1LQ4VXU2 614 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 RARS2Q5T160 578 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 HECTD3Q5T447 861 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PAPD7Q5XG87 772 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 TXNDC8Q6A555 127 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PKN3Q6P5Z2 889 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CD300LDQ6UXZ3 194 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 TMEM184AQ6ZMB5 413 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 CYP4V2Q6ZWL3 525 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 STRADAQ7RTN6 431 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 TAC4Q86UU9 113 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 THNSL2Q86YJ6 484 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 MIB1Q86YT6 1006 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 ZNF276Q8N554 614 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 SMG7Q92540 1137 aaKnown RBP6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PPP2R3CQ969Q6 453 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 WBP2Q969T9 261 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 SLC22A12Q96S37 553 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 PSMB7Q99436 277 aa6.77□□□□□ -1.33
TRA2B-216ENST00000493864 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms