RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DPY19L3Q6ZPD9 716 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 LINC00523Q86TU6 105 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 KLHDC8BQ8IXV7 354 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 OR2T3Q8NH03 318 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 TADA1Q96BN2 335 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 ADGRE3Q9BY15 652 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 CEP41Q9BYV8 373 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 FRMD8Q9BZ67 464 aaPredicted RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 FOXQ1Q9C009 403 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 LRRC40Q9H9A6 602 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 NOD2Q9HC29 1040 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 RPL26L1Q9UNX3 145 aaKnown RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 MTF2Q9Y483 593 aaPredicted RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 RAD51CO43502 376 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 BNIP3LO60238 219 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 ADAM23O75077 832 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 HLA-EP13747 358 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 AOC1P19801 751 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 ITIH2P19823 946 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 PSMB4P28070 264 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 CD86P42081 329 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 MAGEA6P43360 314 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 LMAN1P49257 510 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 DRG2P55039 364 aaKnown RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 MAXP61244 160 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 POLR2LP62875 67 aaKnown RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 SKOR1P84550 965 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 DSC2Q02487 901 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 CAV1Q03135 178 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 NIPAL4Q0D2K0 466 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 CALCOCO2Q13137 446 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 CRY1Q16526 586 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 ZNF776Q68DI1 518 aaPredicted RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 BRAT1Q6PJG6 821 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 GDPD4Q6W3E5 623 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 PPP1R21Q6ZMI0 780 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 PRPF39Q86UA1 669 aaKnown RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 STK40Q8N2I9 435 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 FLCNQ8NFG4 579 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 RUBCNQ92622 972 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 IFT43Q96FT9 208 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 SNF8Q96H20 258 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 ZNF419Q96HQ0 510 aaPredicted RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 EXOC2Q96KP1 924 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 SRPK1Q96SB4 655 aaKnown RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 FSD1LQ9BXM9 530 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 RSPH9Q9H1X1 276 aaPredicted RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 ZDHHC6Q9H6R6 413 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 DKK3Q9UBP4 350 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 PPM1HQ9ULR3 514 aa12.56□□□□□ -0.4
SNX17-208ENST00000493711 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
SNX17-208ENST00000493711 A0A1W2PQF6 199 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
SNX17-208ENST00000493711 METTL18O95568 372 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 AP2A1O95782 977 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ZSCAN5DPP0CG00 497 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ETS1P14921 441 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 TPSB2P20231 275 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 WASP42768 502 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 RGRP47804 291 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
SNX17-208ENST00000493711 CDK18Q07002 472 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 TRIP13Q15645 432 aaPredicted RBP12.55□□□□□ -0.4
SNX17-208ENST00000493711 TPSAB1Q15661 275 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ZNF805Q5CZA5 627 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ARMC12Q5T9G4 340 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ARMC3Q5W041 872 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 PPIL6Q8IXY8 311 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 CAMKK1Q8N5S9 505 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 PAF1Q8N7H5 531 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 GLIS1Q8NBF1 620 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
SNX17-208ENST00000493711 RBM15Q96T37 977 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX17-208ENST00000493711 FAM129BQ96TA1 746 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 SUV39H2Q9H5I1 410 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 FAM114A2Q9NRY5 505 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 WHRNQ9P202 907 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 RAI2Q9Y5P3 530 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 WASF2Q9Y6W5 498 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 DOCK4Q8N1I0 1966 aa12.55□□□□□ -0.4
SNX17-208ENST00000493711 TSPAN11A1L157 253 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 DNALI1O14645 258 aaPredicted RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 LEFTY1O75610 366 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms