RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CCDC74AQ96AQ1 378 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 SEMA3CQ99985 751 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 CRACR2AQ9BSW2 395 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 GULP1Q9UBP9 304 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 AHCTF1Q8WYP5 2266 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 SUV39H1O43463 412 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 TM7SF2O76062 418 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 UGT2B4P06133 528 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 ITGB6P18564 788 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 BMP6P22004 513 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 EIF4A3P38919 411 aaKnown RBP17.91■□□□□ 0.46
NUP50-218ENST00000493456 PEX5P50542 639 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 HK3P52790 923 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 SNRPD1P62314 119 aaKnown RBP17.91■□□□□ 0.46
NUP50-218ENST00000493456 GBP6Q6ZN66 633 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 OR2AP1Q8NGE2 309 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 OR6K2Q8NGY2 324 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 PCDH19Q8TAB3 1148 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 CXorf40AQ8TE69 158 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 ARHGEF2Q92974 986 aaKnown RBP17.91■□□□□ 0.46
NUP50-218ENST00000493456 TMEM159Q96B96 161 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 CPEB1Q9BZB8 566 aaKnown RBP17.91■□□□□ 0.46
NUP50-218ENST00000493456 FOXP3Q9BZS1 431 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 RETREG1Q9H6L5 497 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 TMPRSS4Q9NRS4 437 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 RABGEF1Q9UJ41 708 aa17.91■□□□□ 0.46
NUP50-218ENST00000493456 TMEM110-MUSTN1A8MSY1 372 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 KRIT1O00522 736 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 POP4O95707 220 aaKnown RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 RPLP0P05388 317 aaKnown RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 CELA2BP08218 269 aaPredicted RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 CTSEP14091 401 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 SLC9A1P19634 815 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 GKP32189 559 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 STX17P56962 302 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 CCL7P80098 99 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 TGIF1Q15583 401 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 MANEAQ5SRI9 462 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 FAM102AQ5T9C2 384 aaPredicted RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 ZNF574Q6ZN55 896 aaPredicted RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 GKN2Q86XP6 184 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 ZSCAN1Q8NBB4 408 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 TP53I13Q8NBR0 393 aaPredicted RBP17.9■□□□□ 0.46
NUP50-218ENST00000493456 TMEM35BQ8NCS4 154 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 KLHL32Q96NJ5 620 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 EPAS1Q99814 870 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 EDEM3Q9BZQ6 932 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 SIRPGQ9P1W8 387 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 PISDQ9UG56 409 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 LOXL2Q9Y4K0 774 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 ACTL7AQ9Y615 435 aa17.9■□□□□ 0.46
NUP50-218ENST00000493456 RELNP78509 3460 aa17.89■□□□□ 0.46
NUP50-218ENST00000493456 A0A1W2PQM1 296 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 GTPBP10A4D1E9 387 aaKnown RBP17.89■□□□□ 0.45
NUP50-218ENST00000493456 FAM87AP0C7U9 286 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 HGFP14210 728 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 GABRB2P47870 512 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 MAPKAPK2P49137 400 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 MORC3Q14149 939 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 BNIPLQ7Z465 357 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 TTC7BQ86TV6 843 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 SLC47A2Q86VL8 602 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 C18orf8Q96DM3 657 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 LRRN3Q9H3W5 708 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 MBNL1Q9NR56 388 aaKnown RBP17.89■□□□□ 0.45
NUP50-218ENST00000493456 HPCAL4Q9UM19 191 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 GPR34Q9UPC5 381 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 PCDHGA4Q9Y5G9 962 aa17.89■□□□□ 0.45
NUP50-218ENST00000493456 MMP20O60882 483 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 PPFIA2O75334 1257 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 RASGRP1O95267 797 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 HTR1BP28222 390 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 CDH5P33151 784 aaPredicted RBP17.88■□□□□ 0.45
NUP50-218ENST00000493456 ACVRL1P37023 503 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 BPIFB4P59827 614 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 NFKB2Q00653 900 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 NRG1Q02297 640 aaPredicted RBP17.88■□□□□ 0.45
NUP50-218ENST00000493456 APBA1Q02410 837 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 RAD51Q06609 339 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 SRSF6Q13247 344 aaKnown RBP17.88■□□□□ 0.45
NUP50-218ENST00000493456 IRF4Q15306 451 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 MYLK3Q32MK0 819 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 COLEC12Q5KU26 742 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 GDPD4Q6W3E5 623 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 HID1Q8IV36 788 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 ATL2Q8NHH9 583 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 VOPP1Q96AW1 172 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 PLCB1Q9NQ66 1216 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 PCDHB11Q9Y5F2 797 aa17.88■□□□□ 0.45
NUP50-218ENST00000493456 CD82P27701 267 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 CLCN1P35523 988 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 FLT3P36888 993 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 SUOXP51687 545 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 ZFP36L1Q07352 338 aaKnown RBP17.87■□□□□ 0.45
NUP50-218ENST00000493456 NFATC4Q14934 902 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 LRRC14Q15048 493 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 ALG11Q2TAA5 492 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms