RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 ZNF783Q6ZMS7 281 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 TAS1R1Q7RTX1 841 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 C10orf107Q8IVU9 208 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 ARID3BQ8IVW6 561 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 PLD6Q8N2A8 252 aaKnown RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 GPR150Q8NGU9 434 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 ZNF461Q8TAF7 563 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 PDCD6IPQ8WUM4 868 aaKnown RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 ZNF778Q96MU6 729 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 GPR78Q96P69 363 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 BTBD10Q9BSF8 475 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 CCDC106Q9BWC9 280 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 TBC1D10AQ9BXI6 508 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 C1orf21Q9H246 121 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 NKX2-4Q9H2Z4 354 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 RC3H2Q9HBD1 1191 aaKnown RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 NMRAL1Q9HBL8 299 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 NOD2Q9HC29 1040 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 TRPC7Q9HCX4 862 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 CORO1CQ9ULV4 474 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.85□□□□□ -0.67
USP4-214ENST00000491791 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
USP4-214ENST00000491791 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ILVBLA1L0T0 632 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 F5H5T6 163 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 CLDN11O75508 207 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 KLHL2O95198 593 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 VAPBO95292 243 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 TOP3BO95985 862 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 SOD2P04179 222 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 FGF1P05230 155 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 SBK3P0C264 359 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ATXN1LP0C7T5 689 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 AOC1P19801 751 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 TARSP26639 723 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 CD151P48509 253 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 SLC11A2P49281 568 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 CLCN5P51795 746 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 CCNG1P51959 295 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 AQP5P55064 265 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 DNAJB13P59910 316 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 RAB10P61026 200 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ZBTB16Q05516 673 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP4-214ENST00000491791 ASPHQ12797 758 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 RAB33AQ14088 237 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 IHHQ14623 411 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 LBRQ14739 615 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 AAK1Q2M2I8 961 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 HECTD3Q5T447 861 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 CMC1Q7Z7K0 106 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ADAMTS19Q8TE59 1207 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 PPP4R1Q8TF05 950 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 PSMG2Q969U7 264 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 VWCEQ96DN2 955 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 THOC1Q96FV9 657 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 RPRD1AQ96P16 312 aaPredicted RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 PSKH2Q96QS6 385 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 SEPT5Q99719 369 aaPredicted RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 CLSTN3Q9BQT9 956 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 HERC2P3Q9BVR0 1158 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 FSD1LQ9BXM9 530 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ACE2Q9BYF1 805 aaPredicted RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 POLR1EQ9GZS1 481 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 DRC3Q9H069 523 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 SP110Q9HB58 689 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ARL8BQ9NVJ2 186 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 STK39Q9UEW8 545 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 TLK1Q9UKI8 766 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 APOBEC2Q9Y235 224 aaKnown RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ACOT9Q9Y305 439 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 ARIH1Q9Y4X5 557 aaPredicted RBP10.84□□□□□ -0.67
USP4-214ENST00000491791 CHD9Q3L8U1 2897 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 KIAA1671Q9BY89 1806 aa10.84□□□□□ -0.67
USP4-214ENST00000491791 CXorf51AA0A1B0GTR3 108 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 ABHD14A-ACY1A0A1B0GW23 586 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 SLCO1B7G3V0H7 640 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 GFRA2O00451 464 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 SLC22A2O15244 555 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 GSC2O15499 205 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 ADAM12O43184 909 aa10.83□□□□□ -0.68
USP4-214ENST00000491791 LDB2O43679 373 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms