RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.19□□□□□ -0.14
VTI1A-206ENST00000489142 ETNK2Q9NVF9 386 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 ANAPC7Q9UJX3 599 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 COQ6Q9Y2Z9 468 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 BZW2Q9Y6E2 419 aaKnown RBP14.19□□□□□ -0.14
VTI1A-206ENST00000489142 MYLKQ15746 1914 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 TTC24A2A3L6 582 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 FAM221BA6H8Z2 402 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 TRIM38O00635 465 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 TSPAN6O43657 245 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 BUB1BO60566 1050 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 MMP20O60882 483 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 PALMO75781 387 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 TIMP2P16035 220 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 AMPD1P23109 780 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 GJC1P36383 396 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 EIF4A3P38919 411 aaKnown RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 AFMIDQ63HM1 303 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 SLC25A45Q8N413 288 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 KDF1Q8NAX2 398 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
VTI1A-206ENST00000489142 RNF214Q8ND24 703 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 RAB7BQ96AH8 199 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 C1QTNF2Q9BXJ5 285 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 DNAJC28Q9NX36 388 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 FREM2Q5SZK8 3169 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 ZZEF1O43149 2961 aa14.18□□□□□ -0.14
VTI1A-206ENST00000489142 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 H3BRJ5 948 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 AREL1O15033 823 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 MUSKO15146 869 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 CYP1A2P05177 515 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 RARAP10276 462 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 MYF5P13349 255 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 XPAP23025 273 aaPredicted RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 DGKAP23743 735 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 PCK1P35558 622 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 IGFALSP35858 605 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 SSR1P43307 286 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 ACADVLP49748 655 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 SLC25A11Q02978 314 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 FZD2Q14332 565 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 ALKBH5Q6P6C2 394 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 KYAT3Q6YP21 454 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 TMPRSS7Q7RTY8 843 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 ZSWIM9Q86XI8 627 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 CXorf40AQ8TE69 158 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
VTI1A-206ENST00000489142 PACSIN1Q9BY11 444 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 KLHL11Q9NVR0 708 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 HS3ST3A1Q9Y663 406 aa14.17□□□□□ -0.14
VTI1A-206ENST00000489142 DMXL2Q8TDJ6 3036 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 FPGTO14772 594 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 SIGLEC6O43699 453 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 NEBLO76041 1014 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 ARL4AP40617 200 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 MMRN1Q13201 1228 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 PDE1CQ14123 709 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 PIGHQ14442 188 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 DPYSL2Q16555 572 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 POLNQ7Z5Q5 900 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 SRLQ86TD4 932 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 PSTKQ8IV42 348 aaKnown RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 ZNF564Q8TBZ8 553 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 MDM1Q8TC05 714 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 NSMCE3Q96MG7 304 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 CSPG4P5Q96PW8 444 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 CPEB1Q9BZB8 566 aaKnown RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 TSPY26PQ9H489 355 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 SUV39H2Q9H5I1 410 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 PCDH18Q9HCL0 1135 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 PCDH12Q9NPG4 1184 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 MBNL1Q9NR56 388 aaKnown RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 IP6K2Q9UHH9 426 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 IPO11Q9UI26 975 aaKnown RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 KLF15Q9UIH9 416 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 RALYQ9UKM9 306 aaKnown RBP14.16□□□□□ -0.14
VTI1A-206ENST00000489142 NENFQ9UMX5 172 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.147e-6■■□□□ 12.1
VTI1A-206ENST00000489142 CFAP47Q6ZTR5 3102 aa14.16□□□□□ -0.14
VTI1A-206ENST00000489142 TMEM8BA6NDV4 472 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 RFPL3O75679 317 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 PIAS2O75928 621 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 TM7SF2O76062 418 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 CD48P09326 243 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 RABIFP47224 123 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 HCAR3P49019 387 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 KRT81Q14533 505 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 ACAP1Q15027 740 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 CFAP58Q5T655 872 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 TMCO3Q6UWJ1 677 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms