RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PCDHGB2Q9Y5G2 931 aa14.38□□□□□ -0.11
COL9A2-208ENST00000488463 PRAMEF26H0Y7S4 382 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 TLR4O00206 839 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 RAD51BO15315 384 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 MFSD11O43934 449 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 PALMO75781 387 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 ITIH2P19823 946 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 CR2P20023 1033 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 HADHBP55084 474 aaKnown RBP14.37□□□□□ -0.11
COL9A2-208ENST00000488463 KRT81Q14533 505 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 PDK2Q15119 407 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 ANKRD20A8PQ5CZ79 823 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 LRRC73Q5JTD7 316 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 KIAA1161Q6NSJ0 714 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 GCNT7Q6ZNI0 430 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 SRLQ86TD4 932 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 HCAR2Q8TDS4 363 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
COL9A2-208ENST00000488463 SP110Q9HB58 689 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 FZD3Q9NPG1 666 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 GPR27Q9NS67 375 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 TFR2Q9UP52 801 aa14.37□□□□□ -0.11
COL9A2-208ENST00000488463 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
COL9A2-208ENST00000488463 DMXL2Q8TDJ6 3036 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ANKRD11Q6UB99 2663 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 A0A1B0GTQ1 180 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TRAFD1O14545 582 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SLC31A1O15431 190 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TSPAN6O43657 245 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 PCDHGA12O60330 932 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 KRT37O76014 449 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 PCDH8O95206 1070 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 KRT7P08729 469 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 KDELR1P24390 212 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 PMLP29590 882 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 GJC1P36383 396 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SSR1P43307 286 aaKnown RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 RAD51Q06609 339 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SLC10A2Q12908 348 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 PRAMEF14Q5SWL7 426 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TMCO4Q5TGY1 634 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 KANSL1Q7Z3B3 1105 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ABI3BPQ7Z7G0 1075 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 CAMK1DQ8IU85 385 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 CCDC170Q8IYT3 715 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ASB12Q8WXK4 309 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ECHDC3Q96DC8 303 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 BMFQ96LC9 184 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TUBGCP5Q96RT8 1024 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ELF4Q99607 663 aaPredicted RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SLC17A9Q9BYT1 436 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 SUV39H2Q9H5I1 410 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 ERVMER34-1Q9H9K5 563 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 PCOLCE2Q9UKZ9 415 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 BTBD3Q9Y2F9 522 aa14.36□□□□□ -0.11
COL9A2-208ENST00000488463 REXO2Q9Y3B8 237 aaKnown RBP14.36□□□□□ -0.11
COL9A2-208ENST00000488463 TTC24A2A3L6 582 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 IGLON5A6NGN9 336 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 SOWAHDA6NJG2 315 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 SERPINB6P35237 376 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 MAGEA1P43355 309 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 RXRGP48443 463 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 C21orf59P57076 290 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 GALNT2Q10471 571 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 OVGP1Q12889 678 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 IHHQ14623 411 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 GRM3Q14832 879 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 LRRC38Q5VT99 294 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 LRRC49Q8IUZ0 686 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 SLC22A18ASQ8N1D0 253 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 TEX26Q8N6G2 289 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 MAML1Q92585 1016 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 ZNF641Q96N77 438 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 LENG8Q96PV6 779 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 RNF157Q96PX1 679 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 MYOCQ99972 504 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 CINPQ9BW66 212 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 CALN1Q9BXU9 219 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 CAAP1Q9H8G2 361 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 SEPT3Q9UH03 358 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 SALL4Q9UJQ4 1053 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 HYOU1Q9Y4L1 999 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 PCDHA13Q9Y5I0 950 aa14.35□□□□□ -0.11
COL9A2-208ENST00000488463 EPN1Q9Y6I3 576 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 COL5A1P20908 1838 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-208ENST00000488463 TDRD6O60522 2096 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms