RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RHOAP61586 193 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 MYL5Q02045 173 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 OGDHQ02218 1023 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 RAD51Q06609 339 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 SERINC3Q13530 473 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 CDKN3Q16667 212 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 ZCCHC8Q6NZY4 707 aaKnown RBP12.35□□□□□ -0.43
VPS16-208ENST00000487461 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 UMODL1-AS1Q8N2C9 162 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 CNPY3Q9BT09 278 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 CPEB1Q9BZB8 566 aaKnown RBP12.35□□□□□ -0.43
VPS16-208ENST00000487461 ABCG4Q9H172 646 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 TAS2R14Q9NYV8 317 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 USP12O75317 370 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 CSO75390 466 aaKnown RBP12.34□□□□□ -0.43
VPS16-208ENST00000487461 MPOP05164 745 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 TGM2P21980 687 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
VPS16-208ENST00000487461 YPEL5P62699 121 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 C1orf61Q13536 156 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 PARP15Q460N3 678 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 TP53I13Q8NBR0 393 aaPredicted RBP12.34□□□□□ -0.43
VPS16-208ENST00000487461 MAPK15Q8TD08 544 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 BTN2A2Q8WVV5 523 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 DEPDC7Q96QD5 511 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 EPAS1Q99814 870 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 WRAP53Q9BUR4 548 aaKnown RBP12.34□□□□□ -0.43
VPS16-208ENST00000487461 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 SPASTQ9UBP0 616 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
VPS16-208ENST00000487461 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 LOC400499M0QZD8 3231 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 EME2A4GXA9 379 aaPredicted RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 J3KR12 359 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 TPP1O14773 563 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 YY2O15391 372 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 TEX33O43247 280 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 PIGNO95427 931 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 FERP16591 822 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 LSSP48449 732 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 THOP1P52888 689 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 AIF1P55008 147 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 MAMLD1Q13495 774 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 PTK2BQ14289 1009 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 STX1AQ16623 288 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 WSCD2Q2TBF2 565 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 FAXCQ5TGI0 409 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 EFL1Q7Z2Z2 1120 aaKnown RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 PHACTR4Q8IZ21 702 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 ARFGAP1Q8N6T3 406 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 HCAR2Q8TDS4 363 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 EXOC2Q96KP1 924 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 IL12RB2Q99665 862 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 CLPBQ9H078 707 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 EVA1BQ9NVM1 165 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 UBA2Q9UBT2 640 aaPredicted RBP12.33□□□□□ -0.44
VPS16-208ENST00000487461 COQ6Q9Y2Z9 468 aa12.33□□□□□ -0.44
VPS16-208ENST00000487461 A0A1W2PNU3 283 aaPredicted RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 CASC3O15234 703 aaKnown RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 FGF10O15520 208 aaPredicted RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 PRAMEF11O60813 436 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 GABREP78334 506 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 TLE3Q04726 772 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 IRF4Q15306 451 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 NR0B2Q15466 257 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 CA9Q16790 459 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 UGP2Q16851 508 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 ISXQ2M1V0 245 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 PRRT3Q5FWE3 981 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 PERM1Q5SV97 790 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms